Monarch geneset OGS2.0

DPOGS207274
TranscriptDPOGS207274-TA924 bp
ProteinDPOGS207274-PA307 aa
Genomic positionDPSCF300008 - 27273-28377
RNAseq coverage162x (Rank: top 52%)
Annotation
HeliconiusHMEL0077939e-0746.15% 
BombyxBGIBMGA009619-TA3e-1234.72% 
DrosophilaSocs16D-PA6e-1732.03% 
EBI UniRef50UniRef50_E3VLC28e-12470.65%SOCS6 n=1 Tax=Bombyx mori RepID=E3VLC2_BOMMO
NCBI RefSeqNP_001185652.12e-12470.65%suppressor of cytokine signaling 6 [Bombyx mori]
NCBI nr blastpgi|3112098443e-12370.65%suppressor of cytokine signaling 6 [Bombyx mori]
NCBI nr blastxgi|3112098441e-12270.65%suppressor of cytokine signaling 6 [Bombyx mori]
Group
Gene OntologyGO:00055153.1e-18protein binding
GO:00355562e-07intracellular signal transduction
KEGG pathway 
InterPro domain[159-230] IPR0009803.1e-18SH2 motif
[266-297] IPR0014962e-07SOCS protein, C-terminal
Orthology groupMCL18467 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS207274-TA
ATGAACAAAAATTATGAACGATGTACCCATTGTAACAGGCGCAAGTGGTTGGCTACTGGATGTCTACGAAAATGGTTAAAACCTATGGAATGTAAACACTTACAACGAAGTATTGATAGCAAACGAGATTTCAGTAATACAGACATTGTGAACTGTGTTTTTTTACCTGATCGAAAACCGCCCAGTAATACCAACAAATTTATAAAGTTCTGGAAAAATAAATTGTTTATCACTGGTAGTGTCCGTTCATTACAAAGATACTTTGGTAATAAAAATCGTGATGGAGAGTTTATGTGTGATTTTAACAAAACAGCGGATCCATGCACATCAAGACAAATTATAACAGTGACAAATGAAGTGAAAAAAGATATTTTAGCAGAACATATTACTATGAAGTGTAAACATTCAGATGGCCACTCAGTTCTTAGAGGGCATCATCAACATGTATCAGTAGAGAGCTGTGCTATATATTGTCAACTCTCAAAACATGGCTGGTATTGGGGAGGAATAACATCCAGTGAGGCTGAAGAGCTTCTTGCAGGCCAACATGACAATGTATTCTTGGTACGAGATTCTTATGACTTAAGACACATTCTCTGTGTGTCATTTCGATGCGTTGGCCGAACTCTACATGCTCGACTCAGGCATGCCAATGGTCTTTTTTCTTTAAACAATGAAACTTTTGTGCCAGCAAACAGAATATCAGAACATTGTGCCACTGTAGATGTAAAGTCCAATTTATTTGAAATGCCAGTGAAATTAGCAAGACCTTTAAACAGGTTTGCAAAGTTAGACTCTCTACAAAAGATCTGCAGATTTGTGATAAGGCAAACTGTCTCAGATAATTTATGGAATAAACTGCCACTTCCTCCAAATTTAATATATTATGTATCTTGCGGTAGTGATTACATCGCACCTGTATAA

Protein sequence:

>DPOGS207274-PA
MNKNYERCTHCNRRKWLATGCLRKWLKPMECKHLQRSIDSKRDFSNTDIVNCVFLPDRKPPSNTNKFIKFWKNKLFITGSVRSLQRYFGNKNRDGEFMCDFNKTADPCTSRQIITVTNEVKKDILAEHITMKCKHSDGHSVLRGHHQHVSVESCAIYCQLSKHGWYWGGITSSEAEELLAGQHDNVFLVRDSYDLRHILCVSFRCVGRTLHARLRHANGLFSLNNETFVPANRISEHCATVDVKSNLFEMPVKLARPLNRFAKLDSLQKICRFVIRQTVSDNLWNKLPLPPNLIYYVSCGSDYIAPV-