Monarch geneset OGS2.0

DPOGS207519
TranscriptDPOGS207519-TA873 bp
ProteinDPOGS207519-PA290 aa
Genomic positionDPSCF300177 - 59703-61703
RNAseq coverage442x (Rank: top 28%)
Annotation
HeliconiusHMEL0055221e-14182.59% 
BombyxBGIBMGA001940-TA4e-12579.50% 
DrosophilaCG15440-PA2e-9754.05% 
EBI UniRef50UniRef50_Q8SXG72e-9554.05%CG15440 n=17 Tax=Endopterygota RepID=Q8SXG7_DROME
NCBI RefSeqXP_001655804.11e-10457.91%tRNA selenocysteine associated protein (secp43) [Aedes aegypti]
NCBI nr blastpgi|1571311063e-10357.91%tRNA selenocysteine associated protein (secp43) [Aedes aegypti]
NCBI nr blastxgi|1892390059e-10363.09%PREDICTED: similar to tRNA selenocysteine associated protein (secp43) [Tribolium castaneum]
Group
Gene OntologyGO:00001667.8e-16nucleotide binding
GO:00036764.6e-13nucleic acid binding
KEGG pathwayptm:GSPATT000059630012e-16 
 K12831 (SF3B4, SAP49)maps-> Spliceosome
InterPro domain[95-185] IPR0126777.8e-16Nucleotide-binding, alpha-beta plait
[101-175] IPR0005044.6e-13RNA recognition motif domain
Orthology groupMCL15321 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS207519-TA
ATGGCTATGCAGTGTCAATTATGGATGGGCAGTCTGGAGCCGAACATGACGGAAAGTTTTATATTAGCAGCTTTTCACCGAATGGGGCAGCGGCCGTTGGCTGTTAAAGTTATGAGAAACAAATTTACCGGAGAACCGGCGGGATATGCTTTTGTACATTTTCAGACTGATGAAGAGGCTATAGATACAATGCACAAATTAAATGGTAAACCTATACCTGGCACATTTCCTGTGGTAAGATTCAGACTCAACACAGCATCAAGAGAGGCAAGAGCTAATATGCAACAGGAAAGAGAATTTTCTGTGTGGGTCGGAGACCTTAGTGCAGATGTTGATGACTACTCATTGTATAGGGTGTTTGCCGCCAAATACTCTTCTATAAAAACAGCTAAGGTTATACTTGATAGTTCCGGTTATACAAAAGGTTATGGATTTGTGCGTTTTGGTAATGAAGATGAACAAAGAAATGCACTCTATGCTATGAACGGCTACACGGGATTAGGTTCAAAGCCACTAAAAATTTGTACCGCTGTACCTAAACCTAAAGGTGCTGTCACAACTCAGAGCCCTACTCCAGCAACAGCAACGGCAACATATAGCAGTAGCACCGACTACAGTCATTATTACGATCCATCAGCGTACTGGCAGAACTATTCCGCTTGGTCGGGATATTATGGACAGGATGCCAGCGCTGTGGTACAGGAAGCGGCTCCAGCTGTTAAAGCCCAGGTCGATGAACTGGCTTTGATAGATCACAAGAAAGTACTGGATGTTGATCAGATGAACCAGGAGTTTCTCGATACAGATTTATCCTTATGGGATTCCCTAGAAGCATCACAGTGGTTCCCTCATGAAATCATAGAAGCCTCTTAG

Protein sequence:

>DPOGS207519-PA
MAMQCQLWMGSLEPNMTESFILAAFHRMGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDTMHKLNGKPIPGTFPVVRFRLNTASREARANMQQEREFSVWVGDLSADVDDYSLYRVFAAKYSSIKTAKVILDSSGYTKGYGFVRFGNEDEQRNALYAMNGYTGLGSKPLKICTAVPKPKGAVTTQSPTPATATATYSSSTDYSHYYDPSAYWQNYSAWSGYYGQDASAVVQEAAPAVKAQVDELALIDHKKVLDVDQMNQEFLDTDLSLWDSLEASQWFPHEIIEAS-