| DPOGS207647 | ||
|---|---|---|
| Transcript | DPOGS207647-TA | 249 bp |
| Protein | DPOGS207647-PA | 82 aa |
| Genomic position | DPSCF300133 - 238770-241446 | |
| RNAseq coverage | 112x (Rank: top 59%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL003622 | 1e-34 | 97.06% | |
| Bombyx | BGIBMGA010430-TA | 1e-33 | 92.86% | |
| Drosophila | aret-PB | 1e-29 | 80.88% | |
| EBI UniRef50 | UniRef50_D6X226 | 1e-30 | 89.71% | Putative uncharacterized protein n=4 Tax=Pancrustacea RepID=D6X226_TRICA |
| NCBI RefSeq | XP_976135.1 | 5e-32 | 89.71% | PREDICTED: similar to arrest CG31762-PC isoform 4 [Tribolium castaneum] |
| NCBI nr blastp | gi|91090137 | 1e-30 | 89.71% | PREDICTED: similar to arrest CG31762-PC isoform 4 [Tribolium castaneum] |
| NCBI nr blastx | gi|270013480 | 1e-28 | 89.71% | hypothetical protein TcasGA2_TC012080 [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003676 | 1.8e-18 | nucleic acid binding | |
| GO:0000166 | 2.5e-18 | nucleotide binding | ||
| KEGG pathway | tca:660275 | 2e-31 | ||
| K02177 (BRU) | maps-> | Dorso-ventral axis formation | ||
| InterPro domain | [2-68] IPR000504 | 1.8e-18 | RNA recognition motif domain | |
| [2-64] IPR012677 | 2.5e-18 | Nucleotide-binding, alpha-beta plait | ||
| Orthology group | MCL18360 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207647-TA
ATGTTCGTCGGTCAAGTGCCTAGAAGTATGGACGAAAACGATCTCCGGCTGATGTTTGAAGAGTTTGGGAGGGTCCATCAGATCAATGTGCTAAGAGATAAGATCACGGGAGCAAGTAAAGGGTGCTGTTTTGTGACGTTTTTCACGAGGAAAGCGGCGTTGAAAGCTCAGGACGCTTTGCACAATATCAAAACGTTGAGCGGGGATTCTATTTGTTTCTTCTACTTCGATCCTCCTAAGCTTAATTAA
>DPOGS207647-PA
MFVGQVPRSMDENDLRLMFEEFGRVHQINVLRDKITGASKGCCFVTFFTRKAALKAQDALHNIKTLSGDSICFFYFDPPKLN-