DPOGS207701 | ||
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Transcript | DPOGS207701-TA | 543 bp |
Protein | DPOGS207701-PA | 180 aa |
Genomic position | DPSCF300042 - 1677757-1678820 | |
RNAseq coverage | 780x (Rank: top 17%) |
Annotation | ||||
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Heliconius | HMEL008421 | 1e-65 | 70.22% |   |
Bombyx | BGIBMGA009934-TA | 3e-65 | 67.23% |   |
Drosophila | mRpS18A-PA | 7e-44 | 56.55% |   |
EBI UniRef50 | UniRef50_Q295N6 | 3e-42 | 53.94% | GA16258 n=4 Tax=Sophophora RepID=Q295N6_DROPS |
NCBI RefSeq | XP_001998354.1 | 6e-45 | 55.15% | GI23675 [Drosophila mojavensis] |
NCBI nr blastp | gi|195107508 | 9e-44 | 55.15% | GI23675 [Drosophila mojavensis] |
NCBI nr blastx | gi|195107508 | 1e-41 | 55.15% | GI23675 [Drosophila mojavensis] |
Group | ||||
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Gene Ontology | GO:0005840 | 1.2e-16 | ribosome | |
GO:0006412 | 1.2e-16 | translation | ||
GO:0005622 | 1.2e-16 | intracellular | ||
GO:0003735 | 1.2e-16 | structural constituent of ribosome | ||
KEGG pathway |   | |||
InterPro domain | [70-138] IPR001648 | 1.2e-16 | Ribosomal protein S18 | |
Orthology group | MCL13302 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207701-TA
ATGGCTTTACTAGCTAGAACGGGTGTTTCTTTTTTAAAGAATGCAGTGCTTTCAACATCTGTACGAACGTTATCATTAACAAATAAGTTAAATTTAAAAGAATTACAAGAACGCAAAGAAGGCTCAACTCTTGTAGTAGAAGGTGTAAATGTTCCTTCACCTCGGACTGAATTGCTAATTCGTGCTGAAAATATAAAGGATTTAGTTCAACCTGAAGGGACCCCAAAGGAAACCTGTTACATGTGTGCCCTGGGCTTGGATGTGAAGCATACTGATGTGTTAATTCTGAGTCAATTCGTCAGATCTGACGGCTGTATGTTACCTCGACGTATAACTGGTTTGTGTCGACGCCAACAGAAAAAAATTGGGAAAATGGTGTCCATGGCACAGAAAGCTGGTTTGATGATAAATCTGACACCGAGTTTCTGTAAAAAAGATCCTAAGAAGAGGTACGGCTTTAAGAAGTTCAACTCATATTTCGATGAAACAACAATATTCCAGAAGAAAATACCAACGCCCTTTGAACATTTGAAGAATCGATAA
>DPOGS207701-PA
MALLARTGVSFLKNAVLSTSVRTLSLTNKLNLKELQERKEGSTLVVEGVNVPSPRTELLIRAENIKDLVQPEGTPKETCYMCALGLDVKHTDVLILSQFVRSDGCMLPRRITGLCRRQQKKIGKMVSMAQKAGLMINLTPSFCKKDPKKRYGFKKFNSYFDETTIFQKKIPTPFEHLKNR-