Monarch geneset OGS2.0

DPOGS207772
TranscriptDPOGS207772-TA552 bp
ProteinDPOGS207772-PA183 aa
Genomic positionDPSCF300042 - 187532-188721
RNAseq coverage1926x (Rank: top 6%)
Annotation
HeliconiusHMEL0175732e-9995.63% 
BombyxBGIBMGA005328-TA4e-8490.12% 
DrosophilaCG5885-PA1e-7066.13% 
EBI UniRef50UniRef50_Q9VL691e-6866.13%CG5885 n=19 Tax=Eumetazoa RepID=Q9VL69_DROME
NCBI RefSeqNP_001040330.11e-9390.16%translocon-associated protein gamma isoform 1 [Bombyx mori]
NCBI nr blastpgi|2905632852e-9290.16%translocon-associated protein gamma isoform 1 [Bombyx mori]
NCBI nr blastxgi|2905632851e-8990.16%translocon-associated protein gamma isoform 1 [Bombyx mori]
Group
Gene OntologyGO:00301761.2e-122integral to endoplasmic reticulum membrane
GO:00066131.2e-122cotranslational protein targeting to membrane
GO:00057841.2e-122Sec61 translocon complex
KEGG pathwaynvi:1001209284e-77 
 K13251 (SSR3)maps-> Protein processing in endoplasmic reticulum
InterPro domain[4-183] IPR0097791.2e-122Translocon-associated, gamma subunit
Orthology groupMCL13168 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS207772-TA
ATGTCAGGAAAGGCAAACAAAGCTTTTACGAAGGAGGAAGAGTTGCTGCTACAGGATTTTAGTAGAAATGTATCTACGAAATCTTCTGCCTTATTTTATGGAAATGCATTCATCGTTTCTGCTATACCTATATGGCTGTTCTGGAGAGTTCACGCTTTAGAAGTAAGCTCATCATTGGCTTGGTTTGCTATAGTTACCGTGGCCAGCACTTGGTTGCTTGCTTTAGCTTACCGTAATACCAAGTTCCAATTGAAACACCGTGTCGCTGTACGTCGTGAAGATGCCGTCGCTCGTGAGATGGCTAGAAAGTTGGCTGATGAAAAGAAAATGAGCAGGAAGGAGAAGGATGAAAGAATTTTATGGAAAAAGAATGAAGTTGCTGACTATGAAGCAACAACTTTCTCAATATTTTACAACAATGCTCTATTCTTGACTATTGTTATCCTCGCCAGCTTCTATCTCCTGCGTTCATTCACACCCACCGTTAACTACATTGTATCCCTCACAGTTGCCTCAGGACTTCTGGCTCTTCTGTCTACCGGCTCTAAGTGA

Protein sequence:

>DPOGS207772-PA
MSGKANKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHALEVSSSLAWFAIVTVASTWLLALAYRNTKFQLKHRVAVRREDAVAREMARKLADEKKMSRKEKDERILWKKNEVADYEATTFSIFYNNALFLTIVILASFYLLRSFTPTVNYIVSLTVASGLLALLSTGSK-