Monarch geneset OGS2.0

DPOGS207795
TranscriptDPOGS207795-TA1152 bp
ProteinDPOGS207795-PA383 aa
Genomic positionDPSCF300042 + 232853-237229
RNAseq coverage212x (Rank: top 46%)
Annotation
HeliconiusHMEL0175645e-9348.75% 
BombyxBGIBMGA005488-TA7e-13659.31% 
DrosophilaRfC3-PA2e-4079.31% 
EBI UniRef50UniRef50_Q9VKW33e-3879.31%Replication factor C subunit 3 n=34 Tax=Eukaryota RepID=Q9VKW3_DROME
NCBI RefSeqNP_001040148.13e-5092.71%replication factor C (activator 1) 5 [Bombyx mori]
NCBI nr blastpgi|1140509716e-4992.71%replication factor C (activator 1) 5 [Bombyx mori]
NCBI nr blastxgi|1140509719e-4692.71%replication factor C (activator 1) 5 [Bombyx mori]
Group
Gene OntologyGO:00072644.9e-23small GTPase mediated signal transduction
GO:00055254.9e-23GTP binding
GO:00150314.9e-09protein transport
GO:00160201.4e-05membrane
GO:00071651.4e-05signal transduction
GO:00061841.4e-05GTP catabolic process
GO:00039241.4e-05GTPase activity
KEGG pathwaynvi:1001145784e-42 
 K10756 (RFC3_5)maps-> DNA replication
    Mismatch repair
    Nucleotide excision repair
InterPro domain[106-265] IPR0018064.9e-23Small GTPase superfamily
[104-260] IPR0052251.7e-14Small GTP-binding protein domain
[105-268] IPR0035794.9e-09Small GTPase superfamily, Rab type
Orthology groupMCL15007 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS207795-TA
ATGACGGTTGGGGAGGTCGGCAAAAATCTGCCCTGGGTTGAAAAGTACCGTCCATCTAAATTAGAAGATTTAGTATCTCATGATGATATAGTAAAAACTATCAATCAGTTTATGAAGGAGAATCAGTTGCCCCATTTGCTGTTCTATGGTCCACCAGGTACTGGAAAAACATCCACTATATTAGCTTGTGCGAAACAAATGTATACTCCACAACAATTCAATTCTATGGTTCTAGAATTGAATGCATCAGATGATAGAGGTATAGGTATTGTGAGAGGTCAAATACTAAAAGAAGATAATTTAGTGAAATTCATAAAAATTACCCTCGTGGGGGAACCAGCTACAGGAAAGACTAGTATATGTCGTCGGTTCGTTGGTGCCAATGTTAGTGTTAGTGGCGGTACTCAGGGGGCGGAAGTGACGGCGGCTCAGCTGGCGGGTGTGACGTCACCGCTGCGTCTCTGTGATGTAGCTGGTGCTGCGCTCAACACTGAGATGCTGCCAAATTACTTATTCGACACAGATATACTTATATTTGTGTACGATCTCACGAACTTACAAAGCTTTGAGAGGCTTAAATTATGGATGGAGAAGGTGAAGCAAATCTTGGATTCAGAAAAGAAGAAGCCTTTAATGGCTCTGTTCGGCAACAAATCTGATTTGGAACATCAAAGGGCTGTGAGGTTGTCCTGCGTGCAAAAGTTCGCCTCGGAATATTTCTTAGAAAATTACAAAGGATCTGCCAGGACCGGAGAAACGATAAGCATATTGTTTTCCAATTTGCTATCGAATCTGCTCGGTATAAAACTGAAATCAGATGTACCTCCGTATAAAAGAATTTTGGACACGCAACTGTCTGAAACCGCGAGCATGTCGCCCAGTGAGGAGACAGCCAGCACTCTGATCGTGAATCTAATAGAGAAGTACACAGAGAACGTTCGTTTCTGTATAATATGTAACTACCTCGGGAAGATCATTCCCGCCCTTCAGTCTCGCTGCACCCGGTTCCGGTTCGCACCTCTCCATCAGAACCAAATCATCCCAAGACTGAAAGATATCGCGGAAAAGGAGAATAAAGTTCCCGCCGGATGTTCTAATAACGCTTCTCGTGAAGATGGCGGACTCCGAGGCGAGGCTCGCGAGCGGTTGTAA

Protein sequence:

>DPOGS207795-PA
MTVGEVGKNLPWVEKYRPSKLEDLVSHDDIVKTINQFMKENQLPHLLFYGPPGTGKTSTILACAKQMYTPQQFNSMVLELNASDDRGIGIVRGQILKEDNLVKFIKITLVGEPATGKTSICRRFVGANVSVSGGTQGAEVTAAQLAGVTSPLRLCDVAGAALNTEMLPNYLFDTDILIFVYDLTNLQSFERLKLWMEKVKQILDSEKKKPLMALFGNKSDLEHQRAVRLSCVQKFASEYFLENYKGSARTGETISILFSNLLSNLLGIKLKSDVPPYKRILDTQLSETASMSPSEETASTLIVNLIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLHQNQIIPRLKDIAEKENKVPAGCSNNASREDGGLRGEARERL-