Monarch geneset OGS2.0

DPOGS207813
TranscriptDPOGS207813-TA1539 bp
ProteinDPOGS207813-PA512 aa
Genomic positionDPSCF300042 + 599136-611060
RNAseq coverage2379x (Rank: top 5%)
Annotation
HeliconiusHMEL0119690.093.47% 
BombyxBGIBMGA005503-TA0.087.69% 
DrosophilaLis-1-PB0.074.57% 
EBI UniRef50UniRef50_P430341e-17569.10%Platelet-activating factor acetylhydrolase IB subunit alpha n=125 Tax=Metazoa RepID=LIS1_HUMAN
NCBI RefSeqXP_001843007.10.076.63%platelet-activating factor acetylhydrolase 1b alpha subunit [Culex quinquefasciatus]
NCBI nr blastpgi|1700302590.076.63%platelet-activating factor acetylhydrolase 1b alpha subunit [Culex quinquefasciatus]
NCBI nr blastxgi|1700302590.076.63%platelet-activating factor acetylhydrolase 1b alpha subunit [Culex quinquefasciatus]
Group
Gene OntologyGO:00055151.1e-100protein binding
KEGG pathwaycqu:CpipJ_CPIJ0014480.0 
 K01062 (E3.1.1.47, PAFAH)maps-> Ether lipid metabolism
InterPro domain[196-510] IPR0159431.1e-100WD40/YVTN repeat-like-containing domain
[195-510] IPR0110464.3e-93WD40 repeat-like-containing domain
[369-426] IPR0197815e-14WD40 repeat, subgroup
[429-468] IPR0016802.7e-13WD40 repeat
[224-238] IPR0204728.9e-09G-protein beta WD-40 repeat
Orthology groupMCL12987 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS207813-TA
ATGGTTCGACGAGGACGCTTTATCAATTTGGGACAAGTTCGCCGCGTGCTGATGACCTTAGTTCCGACGAACAAAGCGATCGCTGACTACCTCGGCAGCAATGGCTACAACGACGCTCTGGAAGCGTTCAAGAAGGAGGCGGAGATGACCGGGGAGATGGATCGCAAATTCGGTGGTCTGCTGGAGAAGAAGTGGACATCCGTTATAAGGCTACAGAAGAAGTCCACGGCGTCTATAGTAAATGATTCGTTATTTCAAATTGGAGACCTTAATTACAATTCATTTATATACACTGAGTACTTCGCGTGTTTAGTTTTACGATACAAAACATGTAGTATTAGGAACAAAGCGATCGCTGACTACCTCGGCAGCAATGGCTACAACGACGCTCTGGAAGCGTTCAAGAAGGAGGCGGAGATGACCGGGGAGATGGATCGCAAGTTCGGTGGTCTGCTGGAGAAGAAGTGGACATCCGTTATAAGGCTACAGAAGAAGGTGATGGAACTGGAGTCGAAGCTGTCCGAGGCTCAGAAGGAGTATATAGAGGGTGCTCCGACACGGGCCAAGCGCACGCCCACAGAGTGGATACCACGACCGCCTGAGAAGTTCTCACTGACGGGACATCGGGCAACTATTACTAAGGTGATATTCCACCCGTTGTTCAGCTTGTTCGTGTCGTCCAGCGAGGACGCCACGATCAAAGTGTGGGACTTCGAGAACGGTGACTACGAACGAACCCTCAAGGGTCATACGGACTCCGTACAGGACATCGCGTTCGACCAGCACGGGAAAGTGCTGGCATCCTGCAGCGCGGACATGTCTATAAAGCTGTGGGACTTCAACCAGAGCCACGAGTGCATAAAGACCATGCACGGCCACGACCACAACGTGTCCTCGGTGGCCTTCTCGCCGGGGGGAGACATCGTGTACTCCGCCAGCAGGGACAAGACCATCAAGGCCTGGGAGGTCGCCACTGGTTACTGCGTGAAGACTTACAAGGGTCACCGCGAGTGGGTGAGGATGGTGCGAGTGTCTGCTGACGGGAAGCTGCTCGCTTCCTGTTCCAACGATCAGACCGTACGCATATGGAACGCCGAGACTAACGAATGCAAGATGGAGCTACGCGAGCACGAGCACGTGGTGGAGTGCGTGTCGTGGGCGCCCGAGGCAGCAGCCGCCGCTATCAACGAGGCGGCCGGCGGAGACAACCGCCGCGCCGCCTACCACGGACCCTTCCTCGCGAGCGGCTCCAGGGATAAATCCGTCAAGATCTGGGACGTGACGACGGGGCAATGCCTGGCGACGCTGGTGGGTCACGACAACTGGGTGAGAGGCGCCGCGTGGCATCCCGGCGGACGGTACTTACTGACGGCCTCCGACGACAAGACGCTGCGTGTCTGGGACGTCGCTCACACGCGCTGTCTCAAGACACTGTACGCTCACCAACACTTCGCTACCAGCCTCGATTTCCACAAGAACTTGCCATATGTGATATCCGGCAGCGTCGATCAGACCGTCAAAGTTTGGGAGTGTCGCTAG

Protein sequence:

>DPOGS207813-PA
MVRRGRFINLGQVRRVLMTLVPTNKAIADYLGSNGYNDALEAFKKEAEMTGEMDRKFGGLLEKKWTSVIRLQKKSTASIVNDSLFQIGDLNYNSFIYTEYFACLVLRYKTCSIRNKAIADYLGSNGYNDALEAFKKEAEMTGEMDRKFGGLLEKKWTSVIRLQKKVMELESKLSEAQKEYIEGAPTRAKRTPTEWIPRPPEKFSLTGHRATITKVIFHPLFSLFVSSSEDATIKVWDFENGDYERTLKGHTDSVQDIAFDQHGKVLASCSADMSIKLWDFNQSHECIKTMHGHDHNVSSVAFSPGGDIVYSASRDKTIKAWEVATGYCVKTYKGHREWVRMVRVSADGKLLASCSNDQTVRIWNAETNECKMELREHEHVVECVSWAPEAAAAAINEAAGGDNRRAAYHGPFLASGSRDKSVKIWDVTTGQCLATLVGHDNWVRGAAWHPGGRYLLTASDDKTLRVWDVAHTRCLKTLYAHQHFATSLDFHKNLPYVISGSVDQTVKVWECR-