| DPOGS207824 | ||
|---|---|---|
| Transcript | DPOGS207824-TA | 327 bp |
| Protein | DPOGS207824-PA | 108 aa |
| Genomic position | DPSCF300042 + 825680-826557 | |
| RNAseq coverage | 13140x (Rank: top 1%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | BGIBMGA005511-TA | 1e-33 | 85.71% | |
| Drosophila | levy-PA | 1e-32 | 62.04% | |
| EBI UniRef50 | UniRef50_E9GDM0 | 6e-26 | 50.45% | Putative uncharacterized protein n=1 Tax=Daphnia pulex RepID=E9GDM0_DAPPU |
| NCBI RefSeq | XP_974027.1 | 7e-34 | 55.36% | PREDICTED: similar to CG17280 CG17280-PA [Tribolium castaneum] |
| NCBI nr blastp | gi|146746652 | 1e-38 | 78.70% | mitochondrial cytochrome c oxidase subunit VIa [Bombyx mori] |
| NCBI nr blastx | gi|146746652 | 4e-47 | 78.70% | mitochondrial cytochrome c oxidase subunit VIa [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0004129 | 9.2e-45 | cytochrome-c oxidase activity | |
| GO:0005743 | 9.2e-45 | mitochondrial inner membrane | ||
| GO:0005751 | 9.2e-45 | mitochondrial respiratory chain complex IV | ||
| KEGG pathway | tca:662858 | 2e-33 | ||
| K02266 (COX6A) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Cardiac muscle contraction | ||||
| Parkinson's disease | ||||
| InterPro domain | [23-108] IPR001349 | 9.2e-45 | Cytochrome c oxidase, subunit VIa | |
| Orthology group | MCL12064 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207824-TA
ATGGCTTCATTTTTGAATAGGGCCGCCCAACAATATATGAAGAACAATGTTCGCCTCGCGTCCCACGCTGCTACAGCTGGAGGCCATGGAGGTGGCTGGCAGTTGTGGAAGAGGCTGTCTATCTTCGTCGCAGTACCCGCTATTGGCTTGGGTATGCTGAACGCTTATCTCGCTCACCAAGAAGAGCATCACGAGAGGCCTCCATTTGTGGCTTTTGAATACCTTCGTGTACGCACAAAGCGTTTCCCATGGGGTGATGGCCAAAAGACCCTCTTCCACAACCCCCACGTCAATGCTCTCCCCAGCGGCTATGAAGATGAGCATTAA
>DPOGS207824-PA
MASFLNRAAQQYMKNNVRLASHAATAGGHGGGWQLWKRLSIFVAVPAIGLGMLNAYLAHQEEHHERPPFVAFEYLRVRTKRFPWGDGQKTLFHNPHVNALPSGYEDEH-