DPOGS207824 | ||
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Transcript | DPOGS207824-TA | 327 bp |
Protein | DPOGS207824-PA | 108 aa |
Genomic position | DPSCF300042 + 825680-826557 | |
RNAseq coverage | 13140x (Rank: top 1%) |
Annotation | ||||
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Heliconius | % |   | ||
Bombyx | BGIBMGA005511-TA | 1e-33 | 85.71% |   |
Drosophila | levy-PA | 1e-32 | 62.04% |   |
EBI UniRef50 | UniRef50_E9GDM0 | 6e-26 | 50.45% | Putative uncharacterized protein n=1 Tax=Daphnia pulex RepID=E9GDM0_DAPPU |
NCBI RefSeq | XP_974027.1 | 7e-34 | 55.36% | PREDICTED: similar to CG17280 CG17280-PA [Tribolium castaneum] |
NCBI nr blastp | gi|146746652 | 1e-38 | 78.70% | mitochondrial cytochrome c oxidase subunit VIa [Bombyx mori] |
NCBI nr blastx | gi|146746652 | 4e-47 | 78.70% | mitochondrial cytochrome c oxidase subunit VIa [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0004129 | 9.2e-45 | cytochrome-c oxidase activity | |
GO:0005743 | 9.2e-45 | mitochondrial inner membrane | ||
GO:0005751 | 9.2e-45 | mitochondrial respiratory chain complex IV | ||
KEGG pathway | tca:662858 | 2e-33 |   | |
  | K02266 (COX6A) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Cardiac muscle contraction | |
  |   |   | Parkinson's disease | |
InterPro domain | [23-108] IPR001349 | 9.2e-45 | Cytochrome c oxidase, subunit VIa | |
Orthology group | MCL12064 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207824-TA
ATGGCTTCATTTTTGAATAGGGCCGCCCAACAATATATGAAGAACAATGTTCGCCTCGCGTCCCACGCTGCTACAGCTGGAGGCCATGGAGGTGGCTGGCAGTTGTGGAAGAGGCTGTCTATCTTCGTCGCAGTACCCGCTATTGGCTTGGGTATGCTGAACGCTTATCTCGCTCACCAAGAAGAGCATCACGAGAGGCCTCCATTTGTGGCTTTTGAATACCTTCGTGTACGCACAAAGCGTTTCCCATGGGGTGATGGCCAAAAGACCCTCTTCCACAACCCCCACGTCAATGCTCTCCCCAGCGGCTATGAAGATGAGCATTAA
>DPOGS207824-PA
MASFLNRAAQQYMKNNVRLASHAATAGGHGGGWQLWKRLSIFVAVPAIGLGMLNAYLAHQEEHHERPPFVAFEYLRVRTKRFPWGDGQKTLFHNPHVNALPSGYEDEH-