DPOGS207913 | ||
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Transcript | DPOGS207913-TA | 840 bp |
Protein | DPOGS207913-PA | 279 aa |
Genomic position | DPSCF300931 - 494-4384 | |
RNAseq coverage | 273x (Rank: top 40%) |
Annotation | ||||
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Heliconius | HMEL010826 | 8e-25 | 60.00% |   |
Bombyx | BGIBMGA001698-TA | 3e-60 | 62.63% |   |
Drosophila | CCS-PB | 3e-62 | 55.26% |   |
EBI UniRef50 | UniRef50_F4WKV5 | 1e-67 | 49.00% | Copper chaperone for superoxide dismutase n=12 Tax=Coelomata RepID=F4WKV5_ACREC |
NCBI RefSeq | XP_001600582.1 | 2e-69 | 50.00% | PREDICTED: similar to copper chaperone for superoxide dismutase [Nasonia vitripennis] |
NCBI nr blastp | gi|156549308 | 4e-68 | 50.00% | PREDICTED: copper chaperone for superoxide dismutase-like [Nasonia vitripennis] |
NCBI nr blastx | gi|156549308 | 5e-68 | 54.75% | PREDICTED: copper chaperone for superoxide dismutase-like [Nasonia vitripennis] |
Group | ||||
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Gene Ontology | GO:0004784 | 3.3e-90 | superoxide dismutase activity | |
GO:0055114 | 3.3e-90 | oxidation-reduction process | ||
GO:0006801 | 1.1e-50 | superoxide metabolic process | ||
GO:0046872 | 1.1e-50 | metal ion binding | ||
KEGG pathway | nvi:100116017 | 7e-69 |   | |
  | K04569 (CCS) | maps-> | Amyotrophic lateral sclerosis (ALS) | |
InterPro domain | [21-267] IPR024142 | 3.3e-90 | Superoxide dismutase copper chaperone | |
[21-267] IPR024134 | 3.3e-90 | Superoxide dismutase (Cu/Zn) / chaperones | ||
[65-253] IPR001424 | 1.1e-50 | Superoxide dismutase, copper/zinc binding domain | ||
Orthology group | MCL14572 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207913-TA
ATGATACCATCTAAGCTGGAAGTGCTCGTTGACTTTGGGCCGACCCCAGACAAAGTGACCGTTGAAAAGACTCTCAACTACCTGAACGCCCAAGACGATGTTCAGCAGGCAGTATTTAAGAATGGAGCAGTCATGGTAGAGACGGTGTTACCGAGTTCCGTCGTCTTGGATATGGTGATTAAGACATCGGGGAAGAGGGCTGTTCTTCAAGGATATGGGGACAGTACGTCAGCCGTAGCTATGGTCTCGAGCAAGTGCACCACGGAGCAAGTGCTCGGCGTCATACGCTTCACTCAGACGGACAGCGTCTTGATAGCTGACGGTAGTGTGGACGGCCTTACTCCAGGCCTACACGGACTACACGTGCACGAGAGTGGGGATTTGAGCATGGGTTGCTCCTCTATTGGCGATCACTACAACCCGCTGTCGTCACCTCACGGATCACCCGCCGATCCGCCGTCTGAGAGGCACGCGGGTGATCTGGGGAACATACACGCTGACGAACAAGGACGCGCCAGGTTCAGGATATTTGATAGTGTGCTGCAGATAGACGAGCTGCTGGGTAGGTCGGTGGCAGTCACCCAGCGAGCGGACGACCTCGGCCGGGGCTCGAGCCCCTGTTCAAAAATCAACGGTGACTCCGGACCCCCCATCGCGTGCGGCGTAATAGCTAGATCCGCGGGTATTTTCCAAAACGCCAAGCGGATATGCGCCTGTGATGGCGTCGTGGTCTGGGATGAGAAGGATAGACCTCTGGCGGGGAAAGGACGGCGGTTGAAGGATGATAAAGAGCAGACTGGGAGTGGGAAGTGCGGGGGAAAGACGTGCTGCAAGGTCTAG
>DPOGS207913-PA
MIPSKLEVLVDFGPTPDKVTVEKTLNYLNAQDDVQQAVFKNGAVMVETVLPSSVVLDMVIKTSGKRAVLQGYGDSTSAVAMVSSKCTTEQVLGVIRFTQTDSVLIADGSVDGLTPGLHGLHVHESGDLSMGCSSIGDHYNPLSSPHGSPADPPSERHAGDLGNIHADEQGRARFRIFDSVLQIDELLGRSVAVTQRADDLGRGSSPCSKINGDSGPPIACGVIARSAGIFQNAKRICACDGVVVWDEKDRPLAGKGRRLKDDKEQTGSGKCGGKTCCKV-