Monarch geneset OGS2.0

DPOGS208107
TranscriptDPOGS208107-TA3825 bp
ProteinDPOGS208107-PA1274 aa
Genomic positionDPSCF300395 + 88348-97214
RNAseq coverage337x (Rank: top 34%)
Annotation
HeliconiusHMEL0225780.093.23% 
BombyxBGIBMGA001670-TA0.090.00% 
DrosophilaSra-1-PA0.075.53% 
EBI UniRef50UniRef50_Q9VF870.075.53%Cytoplasmic FMR1-interacting protein n=45 Tax=Coelomata RepID=CYFIP_DROME
NCBI RefSeqXP_967782.10.077.99%PREDICTED: similar to specifically Rac-associated protein, putative [Tribolium castaneum]
NCBI nr blastpgi|3838608270.079.40%PREDICTED: cytoplasmic FMR1-interacting protein-like isoform 1 [Megachile rotundata]
NCBI nr blastxgi|3838608270.079.40%PREDICTED: cytoplasmic FMR1-interacting protein-like isoform 1 [Megachile rotundata]
Group
Gene OntologyGO:00057370cytoplasm
KEGG pathwaytca:6561400.0 
 K05749 (CYFIP)maps-> Regulation of actin cytoskeleton
InterPro domain[4-1273] IPR0080810Cytoplasmic FMR1-interacting
[1-1274] IPR0165360Cytoplasmic FMR1-interacting, subgroup
Orthology groupMCL11264 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS208107-TA
ATGTCTGTGAGTGAAAAGGTGTCCCTTTCTGATGCGTTGAGCAACGTGGATGTCCTGGATGAGCTAACTTTACCAGACGAGCAGCCCTGTATAGAGGCCGCGCCATGTTCCATCCTCTACCAGGCCAACTTTGACACCAACTTTGAAGATCGGAACGGCTTCGTCACCGGCATCGCCAAGTACATTGAGGAGGCCACCGTCCACGCCAACCTGAATGAACTGCTAGAGCAGGGTAACGCCCACGCGGTGATGCTGTACACCTGGAGATGCTGCAGTCGCGCTATCCCTCAGCCGAGGTCCAACGAGCAACCCGACAGGGTCCACATCTACGAGAGGACCGTGCAGGTGTTGGCTCCGGAGGTCAACAAGCTGCTGCAGTTCATGTACTTCCAGCGCAAGGCTATAGAGCGGTTCTGCGGCGAGGTCCGGCGGCTGTGTCACGCTGAGAAGCGACGCGACTTCGTCTCCGAGGCCTACCTCCTCACGCTTGGCAAGTTCGTCAACATGTTCGCGGTGTTGGACGAGCTGAAGAATATGAAGAGCTCCGTCAAGAACGACTACTCCACCTACAGGCGCGCCGCTCAGTTCCTGAAGGTGATGTCGGACAGCCAGAGTCTGCAGGAGTCTCAGAACCTGTCCATGTTCCTCGCCACGCAGAACAAGATAAGAGACACGGTCAAGGACGCGCTGGAGAAGATCACTGGGTACGAGGACCTGCTGTGTGACGTGGTCAACATCTGTGTGCACATGTTCGAGACCAAGATGTATCTGACGCCCTCAGAGAAACACATGCTGGTGAAGGTGATGGGGTTCGGTCTGTTCCTCATGGACTCCGAGGTGTGCAACATCAACCGGCTGGACCAGAAGAAGAAGATAAGGCTCGACCGCATCGACAGGATCTTCAAGAACCTGGAGGTGGTGCCGCTGTTCGGGGACATGCAGATCGCTCCTTTCAACTACATCAAGCGCTCCAAGCACTACGACCCCAGCAAGTGGCCGCTGTCGTCCAGTCCGAGCCCGCCGTCGCCCCAGGCGGACCTGATGGTGCACCTGCCTCAGATCCGCGACGAGCACCAGGACTACATCTCGGAGCTGGCGAGGTACAGCAACGAGGTCACCACAACCTTCAAGGAGGCCGGCTCCGACGCCGAGAACCGCGCGGTCTGCGAGCTGTGTCTGCGGGGCCTGCAGCTGCTGTCGTCCTGGTGCTCCGTGCTCACCGAACTGTGCTCCTGGAAGCTGCTGCACCCCACAGACCACGCCACCAACCCGCGCTGTCCGCCGGACGCCGAGGAGTATGAGCGGGCCACCCGGTACAACTACACGTCGGAGGAGAAGTTCGCGGTGATCGAGGTGGTCGCCATGATCAAGGGTCTGCAGGTGCTCATGGCGCGGATGGAGACCGTGTTCGCGGACGCCGCGAGGAGGGCCATCTACGCCGAGCTGCAGGACTTCGTCACGCTGGCGCTGAGGGAACCGCTGCGGAAGGCCATCAAGAACAAAAAGGACCTCATCAGGAGCATCATAGTGTCGGTGAGGGAGACCTGCGGCGACTGGGCGCGGGGGTGCGAGCCGCAGCAGGACCCGGCGCTGCGAGGGAAGAAGGACTCCGAGAACAGCTTCACCATCAAGGTGCCGCGGAGGAACGTGGGTCCGTCGTCGACCCAGCTGTACATGGTGCGCACCCAGCTGGAGGCCCTCATCAGCGACAAAAGCGGCGGCCGCAGGACTCTCCGCAAGGACCTGGACGCCGGCATCCTCCAGCAGATAGAGACCTTCCACAGGCAGAGCTTCTACTGGACCTACCTGCTGAACCTGGCCGACAGCCTGTCCAAGTGCTGCGACCTGTCCCAGCTGTGGTACCGCGAGTTCTACCTGGAGATGACCATGGGCAGGAAGGTCAACAAGTGTACGGTCCGCCACCAGCACAACGAGGAGTGTAACGACCTCATCACCATGGAGAAGAGGATCCAGTTCCCCATAGAGATGTCCATGCCCTGGATCCTCACCGAGCACATCCTCCGGAGCAAGGACCCCTCCATGATGGAGTACGTGTTGTATCCTCTGGATCTGTACAACGACTCGGCGCAGTACGCCCTGACGGTGTTCAAGAAGCAGTTCCTGTACGACGAGGTGGAGGCCGAGGTCAATCTGTGCTTCGACCAGTTCGTGTACAAGCTGTCCGAGCTCGTGTACTCGCACTACAAGCAGCTGGCGGCCAGTATGTTGCTGGACACCCGATACCGCGCGGACTGCGCGGCCCGGGGTGCGGGCGCTGCGCCCTCGGCCGGGGGCGCCGGCAGGTACGCCTCGCTGCTGAGACAGAGACACGTGGCGCTGCTTGGCCGGCACGTGGACCTGTGCGCGCTGGTGGCGCAGAGGATCAACGCGGACATGCACCGCGCGCTGGACGCGGCCGTCGCCAAGTTCGAGGCTGGAGATATCACGGGCGTTGTGGAGTTGGAGGGTCTGATCGCCGTGAACCGCCTGTGCCACAAGCTGCTGTCCCGCTACCTGACCCTGGACGAGTTCGACGCCATCCTCCGCGAGTCGGATCACGGCGTGCTAGCTCCGTACGGCCGCATCACGCTGCACGTGTTCTGGGAGCTCAACTACGACTTCCTGCCCAACTACTGCTACAACGCCGCCACCGACCGGTTCGTGAAGTGTCGCGGGATCCAGTTCGCCGCGCCGGTGGTCCGCGAGAAGCCCCAGCAGTTCGGCCACGCCGTGCTGTGGGGCTCCAAGCAGCTCAGCCTGGCATACTCCGCCCAGTACGCGCAGTACAACGGGTTCGTGGGTCCGCAGCACCTGCACTCGCTGGTGCGTCTGCTGGGCTACCAGGGCGTGTCGGTGGTGGTGTCGGAGCTGCTGGGCGTGGCGCGCATGTTGCTGCACGGGAACCTGGCGCAGTTCACGCGAGCCCTGGCCGCCGCCATGCCGCGCCACTGCAAGCTGCCCCGATACGACTACGGGTCCAACGGTGTGCTGGGTTACTACCACGCCCAGTTGACGGACATCGTGCAGTACCCGGACGCCAGGACCGAGCTGTTCCACTCGTTCCGGGAACTGGGGAACATCATCCTGTTCTGTATGTTGATAGAACAGGCGCTGAGTCAGGAGGAGGTGACGGACCTGCTGCACGCGGCTCCCTTCCAGAACATTCTGCCGCGACCCTTCACCGCAGAGGGAGAGAAGCCGGAGACCAAGCAGAAGCGACTCGAAGCCAAGTACGCCCCGCTACAGATAGTGCAGAACGTGGAGAAATACGGAACGGCCAAGCAAAGCCAGCTGTCTCGCGAGGGTGACCTGCTGACTCGCGAGCGCCTGTGCTGCGGCCTGTCCCTGTTCTCGGTGGTGCTGAGACGCCTCAAGGCCGTGCTGAGCGCGCCGGCCTGGCCCGCGCCGCCCTCCTCACAACACACCTACATTCACACCGACGACACCGCCGAGTTCCACAGGCTGTGGTCCGCCCTGCAGTTCCTGTACTGCATCCCGGTGGGCGACACGCAGTTCACGGTGGAGGAGCTGTTCGGCGAGGGCCTGCACTGGGCGGGCTGCACCATCATCGCCCTACTGGGGCAGCAGAGACGCTTCGAGGCGCTCGACTTCTGCTACCACATCCTCAGGGTGCAGAGGGTGGACGGCAAGGACGAGCTCGTCAAGGGAATCCCCCTCAAGCGGATGGTGGACCGCATCCGTCGTTTCCAGGTGTTGAACTCCCAGATCTTCAGCGTGTTGTCCCGACATCTGGCCGCAGACGACGAGCGCTCGGGAGTCGAACACGTGCGGTGCTACCCCCCGCCCGCCGCCCACCACCCCTAG

Protein sequence:

>DPOGS208107-PA
MSVSEKVSLSDALSNVDVLDELTLPDEQPCIEAAPCSILYQANFDTNFEDRNGFVTGIAKYIEEATVHANLNELLEQGNAHAVMLYTWRCCSRAIPQPRSNEQPDRVHIYERTVQVLAPEVNKLLQFMYFQRKAIERFCGEVRRLCHAEKRRDFVSEAYLLTLGKFVNMFAVLDELKNMKSSVKNDYSTYRRAAQFLKVMSDSQSLQESQNLSMFLATQNKIRDTVKDALEKITGYEDLLCDVVNICVHMFETKMYLTPSEKHMLVKVMGFGLFLMDSEVCNINRLDQKKKIRLDRIDRIFKNLEVVPLFGDMQIAPFNYIKRSKHYDPSKWPLSSSPSPPSPQADLMVHLPQIRDEHQDYISELARYSNEVTTTFKEAGSDAENRAVCELCLRGLQLLSSWCSVLTELCSWKLLHPTDHATNPRCPPDAEEYERATRYNYTSEEKFAVIEVVAMIKGLQVLMARMETVFADAARRAIYAELQDFVTLALREPLRKAIKNKKDLIRSIIVSVRETCGDWARGCEPQQDPALRGKKDSENSFTIKVPRRNVGPSSTQLYMVRTQLEALISDKSGGRRTLRKDLDAGILQQIETFHRQSFYWTYLLNLADSLSKCCDLSQLWYREFYLEMTMGRKVNKCTVRHQHNEECNDLITMEKRIQFPIEMSMPWILTEHILRSKDPSMMEYVLYPLDLYNDSAQYALTVFKKQFLYDEVEAEVNLCFDQFVYKLSELVYSHYKQLAASMLLDTRYRADCAARGAGAAPSAGGAGRYASLLRQRHVALLGRHVDLCALVAQRINADMHRALDAAVAKFEAGDITGVVELEGLIAVNRLCHKLLSRYLTLDEFDAILRESDHGVLAPYGRITLHVFWELNYDFLPNYCYNAATDRFVKCRGIQFAAPVVREKPQQFGHAVLWGSKQLSLAYSAQYAQYNGFVGPQHLHSLVRLLGYQGVSVVVSELLGVARMLLHGNLAQFTRALAAAMPRHCKLPRYDYGSNGVLGYYHAQLTDIVQYPDARTELFHSFRELGNIILFCMLIEQALSQEEVTDLLHAAPFQNILPRPFTAEGEKPETKQKRLEAKYAPLQIVQNVEKYGTAKQSQLSREGDLLTRERLCCGLSLFSVVLRRLKAVLSAPAWPAPPSSQHTYIHTDDTAEFHRLWSALQFLYCIPVGDTQFTVEELFGEGLHWAGCTIIALLGQQRRFEALDFCYHILRVQRVDGKDELVKGIPLKRMVDRIRRFQVLNSQIFSVLSRHLAADDERSGVEHVRCYPPPAAHHP-