DPOGS208119 | ||
---|---|---|
Transcript | DPOGS208119-TA | 555 bp |
Protein | DPOGS208119-PA | 184 aa |
Genomic position | DPSCF300154 - 91570-92636 | |
RNAseq coverage | 68x (Rank: top 67%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL012271 | 6e-105 | 97.83% |   |
Bombyx | BGIBMGA006771-TA | 2e-104 | 97.83% |   |
Drosophila | CG17266-PA | 2e-93 | 86.41% |   |
EBI UniRef50 | UniRef50_C4QM49 | 1e-79 | 73.96% | Peptidyl-prolyl cis-trans isomerase h, ppih,putative n=9 Tax=Eukaryota RepID=C4QM49_SCHMA |
NCBI RefSeq | XP_001120773.1 | 1e-97 | 91.85% | PREDICTED: similar to CG17266-PA [Apis mellifera] |
NCBI nr blastp | gi|383848460 | 1e-96 | 92.39% | PREDICTED: peptidyl-prolyl cis-trans isomerase H-like [Megachile rotundata] |
NCBI nr blastx | gi|383848460 | 4e-99 | 92.39% | PREDICTED: peptidyl-prolyl cis-trans isomerase H-like [Megachile rotundata] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0006457 | 2.3e-72 | protein folding | |
GO:0003755 | 2.3e-72 | peptidyl-prolyl cis-trans isomerase activity | ||
KEGG pathway | ame:726409 | 4e-97 |   | |
  | K09567 (PPIH, CYPH) | maps-> | Spliceosome | |
InterPro domain | [11-183] IPR002130 | 2.3e-72 | Peptidyl-prolyl cis-trans isomerase, cyclophilin-type | |
[1-184] IPR015891 | 3.6e-70 | Cyclophilin-like | ||
Orthology group | MCL12953 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS208119-TA
ATGCCGACATGGAATCAAATACAAACACAACTCAGAAATCCAAATAATCCAGTTGTATTCTTTGATATTACAGTCGGCACAACTGAAATTGGTCGCATGATATTTGAACTTTTTGCTGATGTTGTACCAAAGACAAGTGAAAACTTCAGAGAATTCTGCACAGGTGAATACAGAAGAGATGGTGTTCCACTTGGTTTCAAAGGCGCAACTTTTCATAGAGTAATAAAAGACTTTATGATACAAGGGGGAGATTTTGTAAATGGTGATGGCACAGGTGTGATGAGTATTTACGGAGGTAGTACATTTGCTGATGAGAACTTTGTAGTAAAGCATGATTCCCCAGGATTATTATCAATGGCAAATAGTGGCAAGGACACAAATGGCTGTCAGTTTTTCATAACTTGCGCCAAGTGTAATTTCTTAGATAATAAGCATGTTGTGTTCGGAAGAGTTATAGATGGTTTATTAGTTATGAGAAAAATTGAAAATGTACCCACAGGACCAAACAATAAACCCAAAATACCAGTGACAATATCACAGTGTGGACAAATGTAA
>DPOGS208119-PA
MPTWNQIQTQLRNPNNPVVFFDITVGTTEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGFKGATFHRVIKDFMIQGGDFVNGDGTGVMSIYGGSTFADENFVVKHDSPGLLSMANSGKDTNGCQFFITCAKCNFLDNKHVVFGRVIDGLLVMRKIENVPTGPNNKPKIPVTISQCGQM-