Monarch geneset OGS2.0

DPOGS208224
TranscriptDPOGS208224-TA519 bp
ProteinDPOGS208224-PA172 aa
Genomic positionDPSCF300079 - 615806-617799
RNAseq coverage15894x (Rank: top 1%)
Annotation
HeliconiusHMEL0079236e-8191.86% 
BombyxBGIBMGA006412-TA1e-3966.19% 
DrosophilaCG1746-PE2e-4057.56% 
EBI UniRef50UniRef50_Q060567e-3358.27%ATP synthase lipid-binding protein, mitochondrial n=4 Tax=Eukaryota RepID=AT5G2_SHEEP
NCBI RefSeqXP_967645.14e-4260.44%PREDICTED: similar to GA14517-PA [Tribolium castaneum]
NCBI nr blastpgi|125851942e-5068.21%ATP synthase subunit c [Manduca sexta]
NCBI nr blastxgi|125851942e-4968.21%ATP synthase subunit c [Manduca sexta]
Group
Gene OntologyGO:00159912e-26ATP hydrolysis coupled proton transport
GO:00331772e-26proton-transporting two-sector ATPase complex, proton-transporting domain
GO:00150782e-26hydrogen ion transmembrane transporter activity
GO:00159867e-26ATP synthesis coupled proton transport
GO:00452637e-26proton-transporting ATP synthase complex, coupling factor F(o)
KEGG pathwaytca:6559951e-41 
 K02128 (ATPeF0C, ATP5G)maps-> Huntington's disease
    Oxidative phosphorylation
    Alzheimer's disease
    Parkinson's disease
InterPro domain[54-119] IPR0023792e-26ATPase, F0/V0 complex, subunit C
[64-83] IPR0004547e-26ATPase, F0 complex, subunit C
Orthology groupMCL12240 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS208224-TA
ATGCTGTACGCCGCCAGATTGATCGCCCCTGCAGCCAGGTCTGCTCTCTTCAGCAACACAGCCCTTGTTAGGCCACTGGCAGCTCTGCCACAAGCGCAGATTGTCCCCGCCCCAGTTTCCCAGCTGTCTGCTGTGCGTTCTTTCCAGACCACAGCAGTCACTAAGGACATTGACTCCGCCGCCAAGTTCATTGGTGCCGGAGCTGCCACAGTTGGAGTGGCTGGATCTGGTATCGGAATTGGTGTGGTGTTTGGATGTTTAATCATTGGCTATGCTCGTAACCCATCATTGAAGCAGCAGATTTTTTCCTATGCTATCTTGGGATTTGCGCTCTCGGAAGCCATGGGACTTTTCTGTGCTGGTATTGGGACAGTTTTTGGTTCCCTTATCATCGGCTATGCTAGAAACCCATCTCTCAAGCAACAGCTGTTCTCATATGCCATCTTGGGTTTCGCCCTGTCCGAGGCCATGGGACTGTTTTGTCTTATGATGGCCTTCCTGTTGCTCTTTGCTTTCTAA

Protein sequence:

>DPOGS208224-PA
MLYAARLIAPAARSALFSNTALVRPLAALPQAQIVPAPVSQLSAVRSFQTTAVTKDIDSAAKFIGAGAATVGVAGSGIGIGVVFGCLIIGYARNPSLKQQIFSYAILGFALSEAMGLFCAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF-