DPOGS208224 | ||
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Transcript | DPOGS208224-TA | 519 bp |
Protein | DPOGS208224-PA | 172 aa |
Genomic position | DPSCF300079 - 615806-617799 | |
RNAseq coverage | 15894x (Rank: top 1%) |
Annotation | ||||
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Heliconius | HMEL007923 | 6e-81 | 91.86% |   |
Bombyx | BGIBMGA006412-TA | 1e-39 | 66.19% |   |
Drosophila | CG1746-PE | 2e-40 | 57.56% |   |
EBI UniRef50 | UniRef50_Q06056 | 7e-33 | 58.27% | ATP synthase lipid-binding protein, mitochondrial n=4 Tax=Eukaryota RepID=AT5G2_SHEEP |
NCBI RefSeq | XP_967645.1 | 4e-42 | 60.44% | PREDICTED: similar to GA14517-PA [Tribolium castaneum] |
NCBI nr blastp | gi|12585194 | 2e-50 | 68.21% | ATP synthase subunit c [Manduca sexta] |
NCBI nr blastx | gi|12585194 | 2e-49 | 68.21% | ATP synthase subunit c [Manduca sexta] |
Group | ||||
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Gene Ontology | GO:0015991 | 2e-26 | ATP hydrolysis coupled proton transport | |
GO:0033177 | 2e-26 | proton-transporting two-sector ATPase complex, proton-transporting domain | ||
GO:0015078 | 2e-26 | hydrogen ion transmembrane transporter activity | ||
GO:0015986 | 7e-26 | ATP synthesis coupled proton transport | ||
GO:0045263 | 7e-26 | proton-transporting ATP synthase complex, coupling factor F(o) | ||
KEGG pathway | tca:655995 | 1e-41 |   | |
  | K02128 (ATPeF0C, ATP5G) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Parkinson's disease | |
InterPro domain | [54-119] IPR002379 | 2e-26 | ATPase, F0/V0 complex, subunit C | |
[64-83] IPR000454 | 7e-26 | ATPase, F0 complex, subunit C | ||
Orthology group | MCL12240 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS208224-TA
ATGCTGTACGCCGCCAGATTGATCGCCCCTGCAGCCAGGTCTGCTCTCTTCAGCAACACAGCCCTTGTTAGGCCACTGGCAGCTCTGCCACAAGCGCAGATTGTCCCCGCCCCAGTTTCCCAGCTGTCTGCTGTGCGTTCTTTCCAGACCACAGCAGTCACTAAGGACATTGACTCCGCCGCCAAGTTCATTGGTGCCGGAGCTGCCACAGTTGGAGTGGCTGGATCTGGTATCGGAATTGGTGTGGTGTTTGGATGTTTAATCATTGGCTATGCTCGTAACCCATCATTGAAGCAGCAGATTTTTTCCTATGCTATCTTGGGATTTGCGCTCTCGGAAGCCATGGGACTTTTCTGTGCTGGTATTGGGACAGTTTTTGGTTCCCTTATCATCGGCTATGCTAGAAACCCATCTCTCAAGCAACAGCTGTTCTCATATGCCATCTTGGGTTTCGCCCTGTCCGAGGCCATGGGACTGTTTTGTCTTATGATGGCCTTCCTGTTGCTCTTTGCTTTCTAA
>DPOGS208224-PA
MLYAARLIAPAARSALFSNTALVRPLAALPQAQIVPAPVSQLSAVRSFQTTAVTKDIDSAAKFIGAGAATVGVAGSGIGIGVVFGCLIIGYARNPSLKQQIFSYAILGFALSEAMGLFCAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF-