Monarch geneset OGS2.0

DPOGS208495
TranscriptDPOGS208495-TA1491 bp
ProteinDPOGS208495-PA496 aa
Genomic positionDPSCF300064 - 915199-919147
RNAseq coverage1099x (Rank: top 11%)
Annotation
HeliconiusHMEL0087620.088.91% 
BombyxBGIBMGA010331-TA0.083.87% 
DrosophilaMRP-PO0.064.19% 
EBI UniRef50UniRef50_D2Y5V60.074.85%ATP-binding cassette sub-family C member 1 n=2 Tax=Trichoplusia ni RepID=D2Y5V6_TRINI
NCBI RefSeqXP_553715.30.070.51%AGAP009835-PA [Anopheles gambiae str. PEST]
NCBI nr blastpgi|2838557870.074.85%ATP-binding cassette sub-family C member 1 [Trichoplusia ni]
NCBI nr blastxgi|2838557870.074.85%ATP-binding cassette sub-family C member 1 [Trichoplusia ni]
Group
Gene OntologyGO:00068102.9e-56transport
GO:00550852.9e-56transmembrane transport
GO:00055242.9e-56ATP binding
GO:00426262.9e-56ATPase activity, coupled to transmembrane movement of substances
GO:00160212.9e-56integral to membrane
GO:00168871e-17ATPase activity
GO:00001665.7e-13nucleotide binding
GO:00171115.7e-13nucleoside-triphosphatase activity
KEGG pathwaydre:1000020108e-180 
 K05665 (ABCC1)maps-> ABC transporters
InterPro domain[3-240] IPR0115272.9e-56ABC transporter, transmembrane domain, type 1
[8-209] IPR0011406.8e-35ABC transporter, transmembrane domain
[297-421] IPR0034391e-17ABC transporter-like
[282-467] IPR0035935.7e-13ATPase, AAA+ type, core
Orthology groupMCL10003 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS208495-TA
ATGCCATTCTTGGCGGGGTGGCGGGCTGCCCGGATACTGCACGAGCTATTGTTGGGGAAAGTGTTGAAAGCGCCGTTGCAATTCTTCGAAGTGACTCCACTTGGCCGCATACTGTCTAGGTTTTCTAAAGACGTGGACGTAGTCGACACCTCGCTCCCGTCAGAGTTCTCCGATGTCATGTATTGCGCCTCCGAGGTTCTTGGCACATTGTTTGTGATAAGTTACTCGACGCCCATATTCCTGGCCGTCATTCTTCCTATCGGGATTGTTTACTACGTCATTCAACGCTTCTACGTGGCCTCCTCCCGGCAGCTGAAGAGATTGGAGTCGGTATCAAGGTCGCCGATATACTCTCACTTCGGAGAGAGCATCACTGGAGCACAAACCATCAGAGCGTACGGCGTCACGCAAAGGTTCATCGAGGAGTCTGAACACGGGGTGGATCACAACCAGGCCTGCTACTACCCGAGCTGCATCGCCAACAGGTGGCTGGCCATCAGGCTCGAGATGATAGGAAATCTCATCATATTCTTCGCTGCCCTGTTCGCTGTCCTCAGCCGCGAAACCATCAACCCCGGCATTGTGGGCTTATCCATCAGTTATTCGCTGCAGATCACACAAACCCTGAACTGGCTGGTGAGAATGACGTCAGAGGTAGAAACCAATATTGTCGCTGTGGAGAGAATCAAAGAGTACGCGGAGACTAAGCAGGAGGCGCCGTGGACGGTCCCATCGGGTCCGGGCTCCACATGGCCAGAGACAGGTGCTCTCCAACTAGAGAGATTGTCCCTGGGATACCGCTCCGACGAACCGGCTCTCAGGGATCTGACATGCGTGGTTGCGCCCGGGGACAAGCTGGGCATAGTGGGACGAACAGGAGCCGGCAAGTCCACGCTCACACTGGGACTGTTCAGGATCGTGGAGGCCATGAGCGGTAAGATACTGATAGACGGGATAGATATATCGACAATCGGCCTTCATCAGCTTCGGTCGAAGATCACCATCATCCCTCAAGATCCTGTACTGTTCGCGGGAACGCTCAGGATGAACCTGGATCCTTTCGAGGTGTACTCCGACGAGGACATCTGGCGCTCCCTGGAACACGCGCATCTTAAAGCGTTTGTACAAGGTCTCCAAGCCGGTCTTCTCCACGAGATCTCCGAGGGCGGTGAGAACCTGTCGGTGGGTCAACGTCAACTGGTCTGCCTGGCACGGGCGCTGCTGAGGAAGACGCCGCTCTTGATACTGGACGAGGCCACCGCCGCCGTAGACCTCGAGACCGACGAACTCATACAAAAAACCATAAGATCGGAGTTCGCGTCGTGCACGGTGTTGACGATCGCCCACCGTCTGAACACCATCATGGACTCGACCCGCGTCATGGTGTTGGACCGCGGCCAGCTGGTGGAGTACGCTCCTCCCCAACAACTGCTGCAGGACAAGAACAGCATCTTTTACGGCATGGCCAAGGACGCTGGGCTCGTTAACTAA

Protein sequence:

>DPOGS208495-PA
MPFLAGWRAARILHELLLGKVLKAPLQFFEVTPLGRILSRFSKDVDVVDTSLPSEFSDVMYCASEVLGTLFVISYSTPIFLAVILPIGIVYYVIQRFYVASSRQLKRLESVSRSPIYSHFGESITGAQTIRAYGVTQRFIEESEHGVDHNQACYYPSCIANRWLAIRLEMIGNLIIFFAALFAVLSRETINPGIVGLSISYSLQITQTLNWLVRMTSEVETNIVAVERIKEYAETKQEAPWTVPSGPGSTWPETGALQLERLSLGYRSDEPALRDLTCVVAPGDKLGIVGRTGAGKSTLTLGLFRIVEAMSGKILIDGIDISTIGLHQLRSKITIIPQDPVLFAGTLRMNLDPFEVYSDEDIWRSLEHAHLKAFVQGLQAGLLHEISEGGENLSVGQRQLVCLARALLRKTPLLILDEATAAVDLETDELIQKTIRSEFASCTVLTIAHRLNTIMDSTRVMVLDRGQLVEYAPPQQLLQDKNSIFYGMAKDAGLVN-