DPOGS208889 | ||
---|---|---|
Transcript | DPOGS208889-TA | 678 bp |
Protein | DPOGS208889-PA | 225 aa |
Genomic position | DPSCF300009 - 951680-952924 | |
RNAseq coverage | 308x (Rank: top 37%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL003888 | 1e-118 | 87.95% |   |
Bombyx | BGIBMGA002461-TA | 3e-101 | 90.96% |   |
Drosophila | CG30499-PA | 7e-94 | 73.49% |   |
EBI UniRef50 | UniRef50_F4WL89 | 6e-88 | 64.85% | Ribulose-phosphate 3-epimerase n=3 Tax=Neoptera RepID=F4WL89_ACREC |
NCBI RefSeq | XP_313959.3 | 3e-96 | 75.45% | AGAP005080-PA [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|383850862 | 6e-97 | 73.99% | PREDICTED: ribulose-phosphate 3-epimerase-like [Megachile rotundata] |
NCBI nr blastx | gi|307181842 | 5e-93 | 74.77% | Ribulose-phosphate 3-epimerase [Camponotus floridanus] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005975 | 1.7e-135 | carbohydrate metabolic process | |
GO:0004750 | 1.7e-135 | ribulose-phosphate 3-epimerase activity | ||
GO:0008152 | 1e-92 | metabolic process | ||
GO:0003824 | 1e-92 | catalytic activity | ||
KEGG pathway | aga:AgaP_AGAP005080 | 8e-96 |   | |
  | K01783 (rpe, RPE) | maps-> | Pentose phosphate pathway | |
  |   |   | Pentose and glucuronate interconversions | |
  |   |   | Carbon fixation in photosynthetic organisms | |
InterPro domain | [5-224] IPR000056 | 1.7e-135 | Ribulose-phosphate 3-epimerase | |
[8-224] IPR013785 | 1e-92 | Aldolase-type TIM barrel | ||
[5-221] IPR011060 | 4.1e-69 | Ribulose-phosphate binding barrel | ||
Orthology group | MCL15282 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS208889-TA
ATGACTCGTCATTTAAAAGCTCTCATAGGTCCTAGCATTCTCAATGCAGACTTATCTAAATTATATGAAGAATCTCAAAAACTCCTAGATAATGGTGCTGACTACTTGCATTTGGATGTGATGGATGGTCATTTTGTTCCTAACCTCACATTAGGACATCCTGTAGTGAAATGTCTCCGCGGTAAAATAAAGGACGCTTTCTTTGAAACACACATGATGGTTTCAAATCCGGAACAGTGGATACTTCCTATGGCAGATGCTGGAGTTAATCAATATACATTCCATATAGAACCAGTAGATAATGTTGAAGAAGTTTGTAGGAAGGTCAGAGAAAACGGAATGAAGGTTGGAGTTGCAATAAAGCCTGGAACATCTGTTACAGAAATAGAAAAGTATATATCTATATCAGACATGGTGCTTATAATGACAGTGGAACCAGGATTTGGGGGTCAAAAGTTTATGGAGAATCAGATGGAGAAAGTGAAATATTTAAGAGATCATTATCCATTATTAGATATTGAAGTTGATGGGGGAGTCGGGCCTTCAACTATTAATTGTTGTGCAACAGCAGGTGCAAACATGATAGTATCTGGAACGGCTATTATAGGATCCAATGACCAAGCATCAACCATTCAATTAATGAGAGATGCTGTACAACAGGCCATTAATAAAAAATAA
>DPOGS208889-PA
MTRHLKALIGPSILNADLSKLYEESQKLLDNGADYLHLDVMDGHFVPNLTLGHPVVKCLRGKIKDAFFETHMMVSNPEQWILPMADAGVNQYTFHIEPVDNVEEVCRKVRENGMKVGVAIKPGTSVTEIEKYISISDMVLIMTVEPGFGGQKFMENQMEKVKYLRDHYPLLDIEVDGGVGPSTINCCATAGANMIVSGTAIIGSNDQASTIQLMRDAVQQAINKK-