Monarch geneset OGS2.0

DPOGS208999
TranscriptDPOGS208999-TA837 bp
ProteinDPOGS208999-PA278 aa
Genomic positionDPSCF300009 + 2068358-2069194
RNAseq coverage45x (Rank: top 71%)
Annotation
HeliconiusHMEL0167802e-11874.64% 
BombyxBGIBMGA012527-TA2e-10768.35% 
DrosophilaCG7675-PB8e-6145.91% 
EBI UniRef50UniRef50_G6D2791e-162100.00%Putative RDH13 n=2 Tax=Eumetazoa RepID=G6D279_DANPL
NCBI RefSeqXP_798545.24e-6950.37%PREDICTED: similar to RDH13 [Strongylocentrotus purpuratus]
NCBI nr blastpgi|1156579777e-6850.37%PREDICTED: similar to RDH13 [Strongylocentrotus purpuratus]
NCBI nr blastxgi|1564001807e-6751.08%predicted protein [Nematostella vectensis]
Group
Gene OntologyGO:00054882.4e-68binding
GO:00081521.1e-20metabolic process
GO:00164911.1e-20oxidoreductase activity
KEGG pathway 
InterPro domain[2-275] IPR0160402.4e-68NAD(P)-binding domain
[3-143] IPR0021981.1e-20Short-chain dehydrogenase/reductase SDR
[4-21] IPR0023472.3e-18Glucose/ribitol dehydrogenase
Orthology groupMCL16297 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS208999-TA
ATGGGAAAAGTTGTTATTGTGACCGGTGGAAACTGCGGCATTGGCTTCGAGACAGCGAAGAACTTAGCCGAGCGGGGAGCACGAGTTATTATCGCCTGTCGCAGCGTTCCACGAGGAGAAAAAGCGGTTAATGAAATCATAGCAGCAACTGGAAATAAAAACGTACTTCATAGACAGCTTGATTTTTCCACATTCAGATCCATACGCGAATTTTGTGATTATATATATAAAACAGAAGAGCGTGTTGATGTCCTTATCAACAACGCGGGCGCCGGAGGGCTTGGCAACAAGAAGACTGAAGATGGGAATCACGTTGGAATGCAGGTCAATTATTACGGACCTTTCCTTTTGACTAATCTCATGCTGCCGTTATTAAAAAAATCGGCGCCGAGTCGAATAATAAATGTATCATCGATGGCACACAAATACGCTGAAATGGATTTCGAAAATTTAAACATGGAAAAATATTGGAGTGATTATCTAGTTTATGCTAACAGCAAATTATTTTTGAATTTAATGACGCTGGAATTAAGTAAAAGGTTAGAAGGGACTGGTGTTACAGTAAATTGTTTACATCCAGGCGCTGCGCCTACCAATATATTTAGAAACATTAAAACTAAGTTTATTCGTAACATAGTGATGATGGTTTTAGAGATCCTATTTAAATCTGTTTGGGAAGCCGCACAAACTTCCATATATCTGGCTGTATCGCCGGAAGTAAATGATGTAAGTGGTCGCTACTTTGTAGATTGTAAAGAGAAGAAACCCTCTAAATTGTCGCAGGACGGAGAAATCGCTAAGAAATTATGGATCGAAACAGAAAAGCTAGTAAAATAG

Protein sequence:

>DPOGS208999-PA
MGKVVIVTGGNCGIGFETAKNLAERGARVIIACRSVPRGEKAVNEIIAATGNKNVLHRQLDFSTFRSIREFCDYIYKTEERVDVLINNAGAGGLGNKKTEDGNHVGMQVNYYGPFLLTNLMLPLLKKSAPSRIINVSSMAHKYAEMDFENLNMEKYWSDYLVYANSKLFLNLMTLELSKRLEGTGVTVNCLHPGAAPTNIFRNIKTKFIRNIVMMVLEILFKSVWEAAQTSIYLAVSPEVNDVSGRYFVDCKEKKPSKLSQDGEIAKKLWIETEKLVK-