DPOGS209011 | ||
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Transcript | DPOGS209011-TA | 831 bp |
Protein | DPOGS209011-PA | 276 aa |
Genomic position | DPSCF300209 - 67809-69044 | |
RNAseq coverage | 2x (Rank: top 92%) |
Annotation | ||||
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Heliconius | HMEL002537 | 2e-92 | 99.39% |   |
Bombyx | BGIBMGA012550-TA | 2e-83 | 92.45% |   |
Drosophila | twr-PA | 1e-78 | 84.47% |   |
EBI UniRef50 | UniRef50_UPI000240CA27 | 1e-74 | 77.65% | UPI000240CA27 related cluster n=1 Tax=unknown RepID=UPI000240CA27 |
NCBI RefSeq | NP_001040280.1 | 2e-88 | 95.71% | signal peptidase 18 kDa subunit [Bombyx mori] |
NCBI nr blastp | gi|114052797 | 3e-87 | 95.71% | signal peptidase 18 kDa subunit [Bombyx mori] |
NCBI nr blastx | gi|114052797 | 7e-85 | 96.30% | signal peptidase 18 kDa subunit [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0016020 | 7e-129 | membrane | |
GO:0008233 | 7e-129 | peptidase activity | ||
GO:0006465 | 7e-129 | signal peptide processing | ||
KEGG pathway | tca:655258 | 1e-84 |   | |
  | K13280 (SEC11, sipW) | maps-> | Protein export | |
InterPro domain | [1-162] IPR001733 | 7e-129 | Peptidase S26B, eukaryotic signal peptidase | |
[51-103] IPR019759 | 4.2e-10 | Peptidase S24/S26A/S26B | ||
[42-97] IPR015927 | 2.5e-08 | Peptidase S24/S26A/S26B/S26C | ||
[49-141] IPR011056 | 1.7e-06 | Peptidase S24/S26A/S26B/S26C, beta-ribbon domain | ||
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS209011-TA
ATGTTGGACAGTTTATTTGACGATGTGAAGCGCATGAATAAAAGACAGTTTATCTACCAAGTTCTTAGCTTTGGTATGATAGTTTCTTCAGCTTTGATGATATGGAAGGGTTTAATGGTTGTCACTGGTAGCGAGAGCCCTATTGTGGTTGTGTTATCCGGCAGTATGGAGCCAGCTTTTCATAGGGGCGACCTTTTATTTTTGACTAACTACCCCGATGAACCCGTCCGTGTTGGAGAAATCGTCGTCTTCAAGGTCGAAGGCCGAGACATTCCTATTGTACACAGAGTGTTAAAGCTACATGAAAAGAATAATGGCACTGTTAAATTTTTAACTAAAGGTGATAACAATAGTGTTGATGATCGAGGCTTATACGCTCAAGGGCAGCTATGGCTGACAAAGAAGGATGTGGTAGGTCGTACTAGAGGGTTCTTACCATACGTTGGTATGGTTACAATATATATGAACGAATATCCTAAGTTTAAGCTGAAGCATAGTGTTATAGTCATGTTGAAAAACTATGAGAATGATCTGTCAGATAGTTGTGTGGACAGAAAATTACTCATATTTCTTCTCAACTTCCAGCAGATCCTTCCAGTCGTAGCGGGCGGAGTTGGTGTTGATGCTGGGCGGCACGGGAGGTTTGACCACGGTCCAGTTGCCCTGGCGTTGCCTCAGAGCACCCAAAGCACAGTACGGCACGCGCATCAAGTTGTCGCCGAATTTATACGGAGGCAGATCGCTGGCGTTATCTTTATTGAGATACTTCAAGGCCGTCACTGTCATCTCCAGAGTGATGGCGTGACCCACGAACAGCAGGTTCTGACCTGA
>DPOGS209011-PA
MLDSLFDDVKRMNKRQFIYQVLSFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHRGDLLFLTNYPDEPVRVGEIVVFKVEGRDIPIVHRVLKLHEKNNGTVKFLTKGDNNSVDDRGLYAQGQLWLTKKDVVGRTRGFLPYVGMVTIYMNEYPKFKLKHSVIVMLKNYENDLSDSCVDRKLLIFLLNFQQILPVVAGGVGVDAGRHGRFDHGPVALALPQSTQSTVRHAHQVVAEFIRRQIAGVIFIEILQGRHCHLQSDGVTHEQQVLT-