| DPOGS209015 | ||
|---|---|---|
| Transcript | DPOGS209015-TA | 579 bp |
| Protein | DPOGS209015-PA | 192 aa |
| Genomic position | DPSCF300209 + 82490-85136 | |
| RNAseq coverage | 194x (Rank: top 48%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002542 | 2e-86 | 78.72% | |
| Bombyx | BGIBMGA012554-TA | 6e-72 | 70.62% | |
| Drosophila | CG10075-PA | 8e-48 | 50.83% | |
| EBI UniRef50 | UniRef50_Q9VRZ7 | 9e-46 | 50.83% | CG10075 n=13 Tax=Drosophila RepID=Q9VRZ7_DROME |
| NCBI RefSeq | XP_001354181.1 | 3e-47 | 51.38% | GA10052 [Drosophila pseudoobscura pseudoobscura] |
| NCBI nr blastp | gi|125980313 | 4e-46 | 51.38% | GA10052 [Drosophila pseudoobscura pseudoobscura] |
| NCBI nr blastx | gi|195174506 | 3e-44 | 51.38% | GL15064 [Drosophila persimilis] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ||||
| InterPro domain | [1-188] IPR007129 | 6.7e-41 | Ubiquinol-cytochrome c chaperone, CBP3 | |
| [33-179] IPR021150 | 1.8e-26 | Ubiquinol-cytochrome c chaperone/UPF0174 | ||
| Orthology group | MCL14128 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209015-TA
ATGTTAAGAAACCGCCAACTTTCTCGGCGCTTAAAACTCACAGGATATGTTTTATATGAAAGTGTACCAGATAAGGTTGCATATAATGAATGGTTTGAAAAACTTGAACTGCCGGACACATTTGCATCATGGTTCATAGTAACGGAGTTACATGTATGGATGTTGCTAGTCCGTTATATGGCTGTAGATATATCATCAGCCACTGGTAAAAAGAAGTATGTGAAAGGCGATGGATACTTTGTAAGGAATTGTATTATAGAAGCACAGTGGGCAGATGTCGGAAACAGGATAAAAATGTTAGAGGGCGCTAATCCAGCCATAGCTAAGAAACAAGTAACGGAACTATCAGAGCAGTTCCAAGCTGCATTAGTTGGTTATGATGAAGGATTGAATGATGACAGAGTTCTAGCAGGGGCTATATGGAGAAGGTTCTACTCAATGTCAGATGATGTTAAAGCCGAGAATGTAGAAAAAATTGTACATTTTATCAGGCATCAGTTATCGGAATTAGATAAAATTCCAAGCGAATCATTGAGGTGGAAACCACAATTGGAATGGTTAAGTATATTAGATCATTAG
>DPOGS209015-PA
MLRNRQLSRRLKLTGYVLYESVPDKVAYNEWFEKLELPDTFASWFIVTELHVWMLLVRYMAVDISSATGKKKYVKGDGYFVRNCIIEAQWADVGNRIKMLEGANPAIAKKQVTELSEQFQAALVGYDEGLNDDRVLAGAIWRRFYSMSDDVKAENVEKIVHFIRHQLSELDKIPSESLRWKPQLEWLSILDH-