| DPOGS209041 | ||
|---|---|---|
| Transcript | DPOGS209041-TA | 405 bp |
| Protein | DPOGS209041-PA | 134 aa |
| Genomic position | DPSCF300102 - 47574-49972 | |
| RNAseq coverage | 2577x (Rank: top 5%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006088 | 2e-30 | 93.22% | |
| Bombyx | BGIBMGA009993-TA | 2e-30 | 76.00% | |
| Drosophila | Past1-PA | 2e-46 | 67.46% | |
| EBI UniRef50 | UniRef50_Q299V4 | 9e-46 | 65.67% | GA19392 n=2 Tax=pseudoobscura subgroup RepID=Q299V4_DROPS |
| NCBI RefSeq | XP_002430570.1 | 9e-55 | 73.81% | EH-domain-containing protein, putative [Pediculus humanus corporis] |
| NCBI nr blastp | gi|242020254 | 2e-53 | 73.81% | EH-domain-containing protein, putative [Pediculus humanus corporis] |
| NCBI nr blastx | gi|242020254 | 2e-53 | 74.40% | EH-domain-containing protein, putative [Pediculus humanus corporis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 3.1e-44 | protein binding | |
| GO:0005509 | 2.2e-36 | calcium ion binding | ||
| KEGG pathway | ame:413012 | 4e-53 | ||
| K12476 (EHD3) | maps-> | Endocytosis | ||
| InterPro domain | [39-133] IPR000261 | 3.1e-44 | EPS15 homology (EH) | |
| [30-134] IPR011992 | 2.2e-36 | EF-hand-like domain | ||
| Orthology group | MCL30715 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209041-TA
ATGGACCGTCAGTGCTGTATGTCGGTGGGCGGAGGTGCCTTCGAGGGAGTGGAGGATCAGGTGTCTCCCTTCGGTTATGGCCGAGGGGAGGGGGTGGACGCCGGTCACGGGGACCCCGAGTGGATCTGCAGCAAGGAGAAGCCTCACTACGATCAGATTTTCCAGTCGCTCAACCCCATGGACGGGAAGGTCACCGGCGCCGCCGCCAAGACTGAGATGTTGAAGTCCAAGTTACCGAACAACGTGCTCGGGAAGATCTGGAAGCTGGCGGACATCGACAAGGACGGCTTCCTGGACGAGGAGGAGTTCGCGCTCGCCATGCATCTCATACGAGTCAAGACCGACGGCCACGACCTGCCGGCGGAGCTGCCGTCGCACCTCGTCCCGCCCTCCAAGAGGAACTAG
>DPOGS209041-PA
MDRQCCMSVGGGAFEGVEDQVSPFGYGRGEGVDAGHGDPEWICSKEKPHYDQIFQSLNPMDGKVTGAAAKTEMLKSKLPNNVLGKIWKLADIDKDGFLDEEEFALAMHLIRVKTDGHDLPAELPSHLVPPSKRN-