MonarchBase - Protein-coding gene

Monarch geneset OGS2.0

DPOGS209363
Transcript	DPOGS209363-TA	408 bp
Protein	DPOGS209363-PA	135 aa
Genomic position	DPSCF300118 - 253678-254208
RNAseq coverage	0x (Rank: top 98%)

Annotation
*Heliconius*			%
*Bombyx*	BGIBMGA005689-TA	3e-17	52.11%
*Drosophila*			%
EBI UniRef50	UniRef50_F7AF29	9e-20	40.80%	Uncharacterized protein (Fragment) n=3 Tax=Metatheria RepID=F7AF29_MONDO
NCBI RefSeq	XP_001194514.1	8e-12	46.75%	PREDICTED: similar to DNA polymerase N [Strongylocentrotus purpuratus]
NCBI nr blastp	gi\|334331455	4e-19	40.80%	PREDICTED: DNA polymerase nu [Monodelphis domestica]
NCBI nr blastx	gi\|334331455	2e-18	40.80%	PREDICTED: DNA polymerase nu [Monodelphis domestica]

Group
Gene Ontology	GO:0003887	9e-10	DNA-directed DNA polymerase activity
	GO:0003677	9e-10	DNA binding
	GO:0006260	9e-10	DNA replication
KEGG pathway	bwe:BcerKBAB4_4417	1e-16
	K02335 (DPO1, polA)	maps->	Purine metabolism
			Base excision repair
			DNA replication
			Homologous recombination
			Nucleotide excision repair
			Pyrimidine metabolism
InterPro domain	[20-127] IPR001098	9e-10	DNA-directed DNA polymerase, family A, palm domain
Orthology group

Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS209363-TA
ATGTATATCCAAAGCACTGGTCTGCATGTAGACATGGAGCAGAGAGGCGTGTGCGTGGATGTGGACGGACTCGAAGCTATGGGAGAGGTGGTGAAGACACGCATGAAGGAAGTGGAGGAGGAGTGTTACCGAGCGGCCGGGAAGCACTTCCAGATTAACTCCGCGCCGCAGCTCCGAGCGATACTGTACGGAGACTTGAAACTAGACCAGAAATGTAATATTACAGTACGGAAAACGACTGCCAAGGGAGACAAGTCCACCTCCGAGGACGTGCTGCGGTCCCTGATGAAGGTTCACCCCCTGCCGGGTCTGATCCTGGAGTACCGTCACCTCCACAAGGCGCACTCCACCTTCATCACCGGCATCGCTCATCACGTCGTGAACGGTGTCGTCAAACCCACTTGGTAG

Protein sequence:

>DPOGS209363-PA
MYIQSTGLHVDMEQRGVCVDVDGLEAMGEVVKTRMKEVEEECYRAAGKHFQINSAPQLRAILYGDLKLDQKCNITVRKTTAKGDKSTSEDVLRSLMKVHPLPGLILEYRHLHKAHSTFITGIAHHVVNGVVKPTW-