| DPOGS209500 | ||
|---|---|---|
| Transcript | DPOGS209500-TA | 213 bp |
| Protein | DPOGS209500-PA | 70 aa |
| Genomic position | DPSCF300127 - 73287-74012 | |
| RNAseq coverage | 2433x (Rank: top 5%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016018 | 6e-28 | 87.14% | |
| Bombyx | BGIBMGA007343-TA | 9e-29 | 87.14% | |
| Drosophila | CG9065-PA | 2e-17 | 81.25% | |
| EBI UniRef50 | UniRef50_Q14061 | 6e-14 | 71.43% | Cytochrome c oxidase copper chaperone n=39 Tax=Bilateria RepID=COX17_HUMAN |
| NCBI RefSeq | XP_552406.2 | 2e-17 | 64.29% | AGAP011826-PA [Anopheles gambiae str. PEST] |
| NCBI nr blastp | gi|307189249 | 4e-17 | 70.00% | Cytochrome c oxidase copper chaperone [Camponotus floridanus] |
| NCBI nr blastx | gi|307189249 | 2e-19 | 70.00% | Cytochrome c oxidase copper chaperone [Camponotus floridanus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005507 | 2.7e-49 | copper ion binding | |
| GO:0005758 | 2.7e-49 | mitochondrial intermembrane space | ||
| GO:0016531 | 2.7e-49 | copper chaperone activity | ||
| GO:0006825 | 2.7e-49 | copper ion transport | ||
| KEGG pathway | aga:AgaP_AGAP011826 | 5e-17 | ||
| K02260 (COX17) | maps-> | Oxidative phosphorylation | ||
| InterPro domain | [1-70] IPR007745 | 2.7e-49 | Cytochrome c oxidase copper chaperone | |
| [8-70] IPR009069 | 2.2e-21 | MTCP1 | ||
| Orthology group | MCL11871 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209500-TA
ATGGGTAATGCAAGTGCGAAAGCTGTGGACGGTAGTGTTCCACCATTGCCCGAACCGGCTCAGGTTGAGAAGCCAAAATTGAAGCCTTGCTGTGCCTGCCCGGAGACCAAAAGAGCACGGGATGCTTGTATTATTGAAAATGGAGAAGAAAATTGCGGCCCGTTGATAGAAGAGCATAAGGCTTGCATGAGAAAGATGGGTTTTAACATATAA
>DPOGS209500-PA
MGNASAKAVDGSVPPLPEPAQVEKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI-