Monarch geneset OGS2.0

DPOGS209545
TranscriptDPOGS209545-TA1572 bp
ProteinDPOGS209545-PA523 aa
Genomic positionDPSCF300092 - 190131-214314
RNAseq coverage19x (Rank: top 80%)
Annotation
HeliconiusHMEL0165362e-13751.14% 
BombyxBGIBMGA012416-TA0.082.60% 
DrosophilanAcRbeta-96A-PA0.067.50% 
EBI UniRef50UniRef50_P251620.067.50%Acetylcholine receptor subunit beta-like 2 n=22 Tax=Neoptera RepID=ACH4_DROME
NCBI RefSeqNP_001166817.10.083.94%nicotinic acetylcholine receptor subunit alpha 8 isoform 1 [Bombyx mori]
NCBI nr blastpgi|1577838380.084.89%nicotinic acetylcholine receptor alpha 8 subunit [Bombyx mori]
NCBI nr blastxgi|1962129570.084.32%nicotinic acetylcholine receptor alpha subunit [Plutella xylostella]
Group
Gene OntologyGO:00160214e-268integral to membrane
GO:00068114e-268ion transport
GO:00160203.4e-67membrane
GO:00068103.4e-67transport
GO:00052303.4e-67extracellular ligand-gated ion channel activity
GO:00048894.1e-15nicotinic acetylcholine-activated cation-selective channel activity
GO:00052164.1e-15ion channel activity
GO:00452114.1e-15postsynaptic membrane
KEGG pathway 
InterPro domain[1-498] IPR0062014e-268Neurotransmitter-gated ion-channel
[1-178] IPR0062023.4e-67Neurotransmitter-gated ion-channel ligand-binding
[266-494] IPR0060295.5e-57Neurotransmitter-gated ion-channel transmembrane domain
[32-46] IPR0023944.1e-15Nicotinic acetylcholine receptor
Orthology groupMCL14613 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS209545-TA
ATGGAGGTGAATTTGAAGAACCAGGTCATGACAACCAACTTGTGGGTGGAACAGAAATGGTTCGACTACAAGCTTCAATGGAATCCAGATGACTATGGAGGTGTTGAGATGCTGTATGTACCTTCAGAGCATATCTGGCTGCCTGATATCGTCCTTTATAATAACTGGGACGGTAATTACGAAGTCACACTTATGACAAAAGCCACTTTAAAGTATACCGGAGAAGTGAATTGGAAGCCTCCAGCAATATACAAGTCCTCGTGTGAGATAAATGTTGAATATTTTCCATTCGATGAGCAGACTTGCTTTATGAAATTCGGTTCTTGGACCTACAACGGAGCTCAGGTGGATTTAAAACATATGGACCAGTTACCTGGGAGTAGTCTCGTTCATGTTGGTATCGATCTTAGTGAGTTTTATTTATCGGTAGAGTGGGATATACTCGAGGTGCCCGCTACTAGAAATGAGGAGTACTATCCTTGCTGTCCCGAACCATTTTCTGACATAACTTTTAAACTAACTATGAGAAGAAAAACTCTGTTCTATACAGTAAACTTAATCATACCCTGTGTTGGGTTGACATTTTTGACTGTGCTTGTATTTTATTTGCCATCGGATTCTGGTGAAAAGATATCGCTCTGCATCTCCATCCTGGTGTCCCTCACTGTGTTCTTCCTTGGTCTGGCCGAGATCATCCCGCCAACATCCTTGGCGATCCCTTTGCTTGGGAAATATCTACTATTCACAATGATTCTCGTGTCGCTCAGCGTTTGGGTCACTGTATGCATTGTAAACATTTCGTTAAGCATCTCGATTCTGGTTTCACTCACCGTGTTTTTCCTGTTGATGGCTGAAATCATACCGCCCACATCTCTAGCAATACCGTTGTTAGGGAAGTATTTGCTGTTTACAATGATTTTGGTATCGCTCAGTGTATGGATGACGGTATGCGTTTTAAATGTTCACTTTAGGTCTCCTTCGACCCACACGATGTCTCCATGGATGAAGAAGCTTTTCCTTCAGCTGATGCCTAAATTGTTGATGATGAGAAGAACCAAATACTCCCTTCCAGACTACGACGACACGTTTGTCTCTAACGGATATACAAATGAGCTGGAAATGAGTAGGGACAGTCTGACTGATGCTTATGGAAGCACCAAGGGCGATGATGGTGACTACTGCAAATCACCAGCTCCTGAGGATGATATGATGGGAGCTGGCGTTCATCAGAGACCTTCAGTAACGGAATCGGAAAATATGCTGCCTCGTCATTTATCACCGGAAGTGGCGGCAGCGCTGCAAAGCGTGAGATTCATAGCACAGCACATCAAAGACGCCGACAAGGATAACGAGGTTGTGGAAGACTGGAAGTTTATGTCTATGGTGTTGGACCGCTTCTTTCTGTGGCTGTTCACCATCGCCTGTTTTGTGGGCACCTTCGGAATTATCTTCCAATCACCGTCACTTTACGACACCAGGGTGCCAGTGGACCAACAGATATCGTCAATACCTATGCGAAAGAACAATTTCTTCTACCCTAAGGATATTGAAACTATTGGTATAGTTAGTTAA

Protein sequence:

>DPOGS209545-PA
MEVNLKNQVMTTNLWVEQKWFDYKLQWNPDDYGGVEMLYVPSEHIWLPDIVLYNNWDGNYEVTLMTKATLKYTGEVNWKPPAIYKSSCEINVEYFPFDEQTCFMKFGSWTYNGAQVDLKHMDQLPGSSLVHVGIDLSEFYLSVEWDILEVPATRNEEYYPCCPEPFSDITFKLTMRRKTLFYTVNLIIPCVGLTFLTVLVFYLPSDSGEKISLCISILVSLTVFFLGLAEIIPPTSLAIPLLGKYLLFTMILVSLSVWVTVCIVNISLSISILVSLTVFFLLMAEIIPPTSLAIPLLGKYLLFTMILVSLSVWMTVCVLNVHFRSPSTHTMSPWMKKLFLQLMPKLLMMRRTKYSLPDYDDTFVSNGYTNELEMSRDSLTDAYGSTKGDDGDYCKSPAPEDDMMGAGVHQRPSVTESENMLPRHLSPEVAAALQSVRFIAQHIKDADKDNEVVEDWKFMSMVLDRFFLWLFTIACFVGTFGIIFQSPSLYDTRVPVDQQISSIPMRKNNFFYPKDIETIGIVS-