Monarch geneset OGS2.0

DPOGS209553
TranscriptDPOGS209553-TA1599 bp
ProteinDPOGS209553-PA532 aa
Genomic positionDPSCF300092 + 86223-115672
RNAseq coverage13x (Rank: top 83%)
Annotation
HeliconiusHMEL0165360.097.18% 
BombyxBGIBMGA012446-TA0.094.63% 
DrosophilanAcRalpha-96Aa-PA0.077.41% 
EBI UniRef50UniRef50_P094780.077.41%Acetylcholine receptor subunit alpha-like 1 n=45 Tax=Coelomata RepID=ACH1_DROME
NCBI RefSeqNP_001103388.10.095.12%nicotinic acetylcholine receptor subunit alpha 1 [Bombyx mori]
NCBI nr blastpgi|1577838240.095.68%nicotinic acetylcholine receptor alpha 1 subunit [Bombyx mori]
NCBI nr blastxgi|1577838240.096.44%nicotinic acetylcholine receptor alpha 1 subunit [Bombyx mori]
Group
Gene OntologyGO:00160218.6e-305integral to membrane
GO:00068118.6e-305ion transport
GO:00160203.3e-86membrane
GO:00068103.3e-86transport
GO:00052303.3e-86extracellular ligand-gated ion channel activity
GO:00048893e-25nicotinic acetylcholine-activated cation-selective channel activity
GO:00052163e-25ion channel activity
GO:00452113e-25postsynaptic membrane
KEGG pathway 
InterPro domain[1-509] IPR0062018.6e-305Neurotransmitter-gated ion-channel
[24-237] IPR0062023.3e-86Neurotransmitter-gated ion-channel ligand-binding
[238-505] IPR0060292.7e-81Neurotransmitter-gated ion-channel transmembrane domain
[57-73] IPR0023943e-25Nicotinic acetylcholine receptor
Orthology groupMCL15989 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS209553-TA
ATGGTGTTGGCGTTTGTGGTCGGAGTGCTTTGCGTGTGGGGCCGCTTGAGCGTCGCAAACCCTGAAGCGAAGCGGCTATACGACGACCTCCTCTCCAACTACAATAGATTGATCCGCCCCGTCGGCAACAATTCAGATCGACTCACAGTTAAGATGGGTTTAAGGCTTAGTCAGCTCATTGACGTCAATCTTAAGAATCAAATTATGACAACGAACGTTTGGGTAGAACAGGAATGGAATGACTACAAATTAAAATGGAACCCCGACGATTATGGAGGAGTTGACACCCTGCACGTGCCATCAGAACACATATGGTTACCAGACATCGTTTTATATAATAACGCGGATGGAAATTACGAAGTTACGATTATGACAAAAGCGATTCTACATCACGACGGAAAAGTTGTCTGGAAACCGCCTGCCATATATAAGTCCTTTTGTGAAATCGACGTGGAGTACTTCCCCTTCGACGAACAAACCTGTTTCATGAAGTTCGGCTCATGGAGCTATGATGGCTATACGGTGGACTTGAGGCACTTAAAGCAAACACCAGATTCCGATCACATAGGAATGGGTATTGATTTGTCGGAATACTACATTTCTGTGGAATGGGACATAATGCGGGTACCGGCAACGCGGAACGAAAAGTTCTACTCGTGCTGTGAAGAACCTTATCCTGATATAATTTTCAACCTCACACTTAGGAGGAAAACCCTCTTCTATACGGTCAATCTCATCATACCCTGTGTTGGAATTTCATTTTTATCAGTCCTTGTCTTTTATCTGCCTTCAGATTCAGGAGAAAAAATTTCACTTTGCATCTCTATCCTACTTTCTCTGACCGTGTTCTTTTTATTGTTAGCAGAAATTATTCCACCCACTTCGCTCACTGTTCCTTTATTAGGAAAATATTTGCTATTTACAATGATGCTTGTAACATTATCGGTCGTTGTCACTATCGTGGTGCTAAACGTAAATTTTAGATCACCAGTAACTCACCACATGGCTCCTTGGGTACGAAAAGTCTTTATTGATTTTTTACCCCGAATATTATGTATACAAAGGCCAGAAAAACCACCCGATGATGACGAAAATGATAAACCCTCTGAGGTTCTTACGGACGTGTTTGGTGAAGACGACATGGATGGAAAATTTAAAGAGTGGGGATGTGAAGAATATGAGCTACCAGGTATGCCACCGTCTCCTCCACCTCCTCCGGGAGGTGACGATGAGTTGTTTTCCCCACCTCCAGGATCACCTTGTCGAATAGAGCTCGATGATGGTAGTCCATCGTTTGAAAAACCTTTTGTTAGAGAAATGGAAAAAACGATAGAAGGTTCCAGATTTATTGCTCAGCATGTAAAAAATAAGGATAAGTTTGAAAGTGTGGAGGATGATTGGAAATACGTTGCCATGGTCTTGGATAGAATTTTCCTGTTTGCGTTTACGATAGCTTGTGTACTGGGAACGGCGCTCATTATATTTAGGGCGCCAACATTTTATGATAACACAAAGCCCATCGATATTCTGTACTCGAAAATTGCTAAGAAAAAGTTGGAGCTACTTAAAATGGGTTCCGAGGGTGACCCGGGTCTCTGA

Protein sequence:

>DPOGS209553-PA
MVLAFVVGVLCVWGRLSVANPEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHDGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWSYDGYTVDLRHLKQTPDSDHIGMGIDLSEYYISVEWDIMRVPATRNEKFYSCCEEPYPDIIFNLTLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIVVLNVNFRSPVTHHMAPWVRKVFIDFLPRILCIQRPEKPPDDDENDKPSEVLTDVFGEDDMDGKFKEWGCEEYELPGMPPSPPPPPGGDDELFSPPPGSPCRIELDDGSPSFEKPFVREMEKTIEGSRFIAQHVKNKDKFESVEDDWKYVAMVLDRIFLFAFTIACVLGTALIIFRAPTFYDNTKPIDILYSKIAKKKLELLKMGSEGDPGL-