DPOGS209649 | ||
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Transcript | DPOGS209649-TA | 510 bp |
Protein | DPOGS209649-PA | 169 aa |
Genomic position | DPSCF300015 + 1188406-1189406 | |
RNAseq coverage | 98x (Rank: top 61%) |
Annotation | ||||
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Heliconius | HMEL017060 | 2e-82 | 83.43% |   |
Bombyx | BGIBMGA006711-TA | 6e-69 | 83.22% |   |
Drosophila | CG14414-PD | 2e-28 | 40.80% |   |
EBI UniRef50 | UniRef50_Q2F5W6 | 3e-78 | 75.82% | RNA binding motif protein 18 n=10 Tax=Endopterygota RepID=Q2F5W6_BOMMO |
NCBI RefSeq | NP_001040210.1 | 6e-79 | 75.82% | RNA binding motif protein 18 [Bombyx mori] |
NCBI nr blastp | gi|114052060 | 8e-78 | 75.82% | RNA binding motif protein 18 [Bombyx mori] |
NCBI nr blastx | gi|114052060 | 4e-75 | 75.82% | RNA binding motif protein 18 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0000166 | 2.1e-12 | nucleotide binding | |
GO:0003676 | 2.9e-08 | nucleic acid binding | ||
KEGG pathway |   | |||
InterPro domain | [4-84] IPR012677 | 2.1e-12 | Nucleotide-binding, alpha-beta plait | |
[10-73] IPR000504 | 2.9e-08 | RNA recognition motif domain | ||
Orthology group | MCL12307 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS209649-TA
ATGCACTCAGAACAGACTTGCGACAAACGGCTGTGGATCGGGAACCTGGATCTGAGAGTCAATGAGTATAAGTTTGATATGCTGTTTCATCGGAGCGGGCCGAATGCTGGCCAGCCAAGAGGTTTCGCCTTTGTCACATATAAGTTGAAACAAGATGCCATAAAAGCCATGGCCTCACTCAATGGACAGCTCCTTGGATCTAAAAGGATTTGTGTCAAATATGCCAAGAACACATCAGATGAACAGGAAAAGCCAAAACCAGAATTTGGTATTGCAGCACTGTCCGGTGTTAAGCCAGAGTTTAAACTTAGCAAAAAAACGGCCATACAGTCTATAGAGGCGAAACTAAAGATGATGGAAAATATGAAAGCTGGTGATGACTTTGTCATCAACAGGTTGGCCGCTAATGAAGCTCCAGTGATCACTCAATATCAAACAAAACAACATCAGCCCCCAAATAGGACTATTAGCTCATTCAAAAGGCGACATCCCTACCATAAGAAGAGATAA
>DPOGS209649-PA
MHSEQTCDKRLWIGNLDLRVNEYKFDMLFHRSGPNAGQPRGFAFVTYKLKQDAIKAMASLNGQLLGSKRICVKYAKNTSDEQEKPKPEFGIAALSGVKPEFKLSKKTAIQSIEAKLKMMENMKAGDDFVINRLAANEAPVITQYQTKQHQPPNRTISSFKRRHPYHKKR-