| DPOGS209700 | ||
|---|---|---|
| Transcript | DPOGS209700-TA | 366 bp |
| Protein | DPOGS209700-PA | 121 aa |
| Genomic position | DPSCF300309 + 101751-104354 | |
| RNAseq coverage | 16998x (Rank: top 1%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009836 | 3e-56 | 97.25% | |
| Bombyx | BGIBMGA001991-TA | 4e-55 | 96.33% | |
| Drosophila | RpL36-PB | 9e-41 | 71.05% | |
| EBI UniRef50 | UniRef50_P49630 | 2e-38 | 71.05% | 60S ribosomal protein L36 n=84 Tax=Eukaryota RepID=RL36_DROME |
| NCBI RefSeq | NP_001037245.1 | 1e-53 | 96.33% | ribosomal protein L36 [Bombyx mori] |
| NCBI nr blastp | gi|308512791 | 5e-56 | 95.80% | ribosomal protein L36 [Biston betularia] |
| NCBI nr blastx | gi|315115415 | 1e-59 | 98.36% | ribosomal protein L36 [Euphydryas aurinia] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 6.9e-59 | ribosome | |
| GO:0006412 | 6.9e-59 | translation | ||
| GO:0005622 | 6.9e-59 | intracellular | ||
| GO:0003735 | 6.9e-59 | structural constituent of ribosome | ||
| KEGG pathway | nvi:100118462 | 3e-46 | ||
| K02920 (RP-L36e, RPL36) | maps-> | Ribosome | ||
| InterPro domain | [1-119] IPR000509 | 6.9e-59 | Ribosomal protein L36e | |
| Orthology group | MCL11152 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209700-TA
ATGGCACCCCGGTTTGAGATCGCAGTTGGTCTGCGAAAAGGCCACAAAACCACCAAAATATCTGCTGGCAAAAAAGGTATCACAGACAAAGCCATCAGAATCAGACCCGCAAGACTAAAGGGTCTTCAAACAAAGCACTCCAAGTTCGTCCGCGACCTGGTCAGAGAAGTCGTTGGTCATGCTCCTTACGAGAAGAGAGCTATGGAGTTGCTTAAGGTATCGAAGGACAAGCGCGCTCTCAAGTTCTTGAAGCGTCGCCTCGGTACACACATCCGGGCTAAGAGGAAGCGTGAGGAGATGAGCAACGTTTTGGTACAGATGAGGAAGGCCGCTGCACAGGCCCATCACGCCACACACGCCCATTAA
>DPOGS209700-PA
MAPRFEIAVGLRKGHKTTKISAGKKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEMSNVLVQMRKAAAQAHHATHAH-