| DPOGS209710 | ||
|---|---|---|
| Transcript | DPOGS209710-TA | 669 bp |
| Protein | DPOGS209710-PA | 222 aa |
| Genomic position | DPSCF300105 - 404594-405511 | |
| RNAseq coverage | 8705x (Rank: top 2%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL011339 | 2e-100 | 87.84% | |
| Bombyx | BGIBMGA008921-TA | 3e-97 | 87.84% | |
| Drosophila | Ef1beta-PA | 4e-73 | 71.75% | |
| EBI UniRef50 | UniRef50_P29522 | 7e-96 | 88.29% | Elongation factor 1-beta' n=6 Tax=Endopterygota RepID=EF1B2_BOMMO |
| NCBI RefSeq | NP_001037556.1 | 1e-96 | 88.29% | elongation factor 1-beta' [Bombyx mori] |
| NCBI nr blastp | gi|49532904 | 1e-103 | 85.65% | elongation factor 1 beta' [Plutella xylostella] |
| NCBI nr blastx | gi|112982743 | 3e-110 | 88.29% | elongation factor 1-beta' [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003746 | 3.1e-42 | translation elongation factor activity | |
| GO:0006414 | 3.1e-42 | translational elongation | ||
| GO:0005853 | 3.1e-42 | eukaryotic translation elongation factor 1 complex | ||
| KEGG pathway | ||||
| InterPro domain | [129-222] IPR014717 | 1.1e-47 | Translation elongation factor EF1B/ribosomal protein S6 | |
| [136-222] IPR014038 | 3.1e-42 | Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange | ||
| [100-127] IPR018940 | 2.1e-12 | Elongation factor 1 beta central acidic region, eukaryote | ||
| Orthology group | MCL12300 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209710-TA
ATGGCAATCGGAGACGTTAAATCTGCACAAGGTCTAAGTGAATTGAACCAATATTTGGCAGAAAAGAGCTACATATCTGGATATGTGCCCTCTCAAGCCGATGTTCAAGTTTTCGAGGAAGTAGGCAAAGCGCCGGCCGCTAGCCTGCCACACGCTCTCCGTTGGTACAACCACATCGCCTCATATTCTTCCGCAGAGCGTAAGGCATGGGCTGATGGAGTGAGCCCACTCAGCGCCGGCGCTAAACCAACAGCACCTGCAGCCGCCAAGAAAGATGATGATGACGATGACATCGATCTTTTCGGCTCCGGTGATGAAGAAGAGGATGCAGAGGCAGCAAGAGTTCGTGAGGAACGTCTGAAGGCGTATGCTGACAAAAAATCTAAGAAACCCACCCTTATTGCTAAGTCATCTATAATCCTTGATGTGAAACCATGGGATGATGAAACTGACATGGCTGAAATGGAAAAGCAAGTGAGAACCATTGAAATGGACGGTCTCTTATGGGGTGCCTCCAAACTGGTACCGGTTGGCTATGGTATCAATAAATTGCAAATCATGTGTGTCATTGAAGATGACAAGGTTTCTGTTGATCTTCTAACAGAGAAGATCCAAGAATTTGAAGATTTCGTCCAGTCTGTAGACATTGCTGCCTTCAATAAAATCTAA
>DPOGS209710-PA
MAIGDVKSAQGLSELNQYLAEKSYISGYVPSQADVQVFEEVGKAPAASLPHALRWYNHIASYSSAERKAWADGVSPLSAGAKPTAPAAAKKDDDDDDIDLFGSGDEEEDAEAARVREERLKAYADKKSKKPTLIAKSSIILDVKPWDDETDMAEMEKQVRTIEMDGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQEFEDFVQSVDIAAFNKI-