Monarch geneset OGS2.0

DPOGS209720
TranscriptDPOGS209720-TA3810 bp
ProteinDPOGS209720-PA1269 aa
Genomic positionDPSCF300105 - 227032-241723
RNAseq coverage314x (Rank: top 36%)
Annotation
HeliconiusHMEL0113620.066.12% 
BombyxBGIBMGA008931-TA0.075.38% 
DrosophilaTER94-PC2e-5034.48% 
EBI UniRef50UniRef50_E2B2M30.036.31%ATPase family AAA domain-containing protein 2B n=1 Tax=Harpegnathos saltator RepID=E2B2M3_HARSA
NCBI RefSeqXP_001603905.10.047.91%PREDICTED: similar to rCG61344 [Nasonia vitripennis]
NCBI nr blastpgi|3504167510.037.74%PREDICTED: ATPase family AAA domain-containing protein 2-like [Bombus impatiens]
NCBI nr blastxgi|3504167510.037.03%PREDICTED: ATPase family AAA domain-containing protein 2-like [Bombus impatiens]
Group
Gene OntologyGO:00055241.4e-40ATP binding
GO:00055153.3e-32protein binding
GO:00001667.6e-19nucleotide binding
GO:00171117.6e-19nucleoside-triphosphatase activity
KEGG pathwaymfs:MFS40622_07863e-59 
 K13525 (VCP, CDC48)maps-> Protein processing in endoplasmic reticulum
InterPro domain[458-593] IPR0039591.4e-40ATPase, AAA-type, core
[896-1036] IPR0014873.3e-32Bromodomain
[454-596] IPR0035937.6e-19ATPase, AAA+ type, core
Orthology groupMCL15450 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS209720-TA
ATGGTGAAAACCCGACGTAGCAACGGTGAGAATGGGGAGGTTGACGAAGGAAATTATTCAATAAACGATGTTGGAAGCATCTCTGATGAGAAGGCATCAAATTGGTCCCAACGAGAGTTAAGAAGTAGTCAATATAAAGTTGCGAGAAAAATCCAACGCTGGCCGACAAGATACAGCCGCAGTAGACTCCGCGCTATAAAAATGCCGAGAATTATGTTTCCTGAAAGTGACACCGAACCAGAAAAATATTCAAGGAGATCCCGGCAAGTTAGAGTTTTCTTTGCTGATGATAATGATGCTAGTAACAGGAGCATGAAGATACGTCGCAATCGTGGACCCAGGAAGAACTACATGGAAGACAGCGAAGATAAGCCAATACAACAAAATGTGCGGCGAAGTTGCCGGAAGCGGAAGTTGCTCCATCACAATTTTAATGAAAGCTGGATTACTAATGAGCTAAAAGTCAAAGGATATCCTGACTTGTACGGATTTAATGGCACCAGTTCCTCTGACGAATTCTCCTCTGGTGATGAAGCGAGGGAATCTAAGAAATTGACTCGTAGTCACCCGCCTACAAACACCGATGAAGACACTCAGCTGTCCAGGCAAAGAAGAACTTCAGCTAGATTCACTAATAATAAAAAGGATGTGACAGATTCGGATTCAGACAATGAAAACAATCAAACGGTCATCGAAAAGAAGCCAGTGGAAGCCAAGCAGGAGAGTGACAAGAACGAAACAGAAGATAAACAGAAGACAGAGAGAGAAGAAAAGGCTGAGGTCAAAGAGGAACAAGACAGCAACAGTAACCAAGGTCCAGCTCGTTCAACCCGGGGCAGAGGTAGGAGAGGTCAAAAGAAAGACAGCCACCAGGAAACAGCGTCTTCATCGTCCGAGTCCAGCGCGCCGCGAGCTCGCCGGCCGCGACGATCCGAGAGGGCTCGAGCACCGCCGGCCTTCGTGCAGCTGGCTGACCGGGAGACGAGGACCCGAGGTAAATCCTTTGCCCTGAGAAAGAAGCCATACAGTCTAAGGGAAAGAAAACCGAAATTACTTCGTAGAAAAACGATTAGATCCCAATCACCGTCCAGCAGCAGCAGCAGCAGCAGCACCAGCAGCTCCGATACTGAGGAGGATTTGAATGTATCGATGAAAAATAAAACCAAGGGCAGGCAAAAATCCAAGTGTATAGATGACAAAAAGACTGACAGGGCGCTGAGGGACATACAGCCCATTGAAGTGGACGGCAGTGTGAGGTTCTCATCAGTCGGCGGTTTGGAGGAGCATATAAAGTGTCTGCGAGAAATGGTTCTCTTCCCGCTCATGTATCCGAGTTTGTTCGAAAAGTTTAAGACTCGACCCGCCAAGGGTGTTCTGTTCCACGGCCCACCCGGGACTGGCAAGACCCTGCTGGCACGAGCGTTAGCCAACGAGTGCAGTTTGATCGGCGGACGGAAGGTCGCCTTCTTCATGAGGAAGGGGGCTGACTGCTTAAAGAAATGGGTGGGGGAGAGCGAACGGCATCTGAAGTTGCTGTTCCAACAGGCTAACAAAATGAAACCATCGATAATATTCTTCGACGAGATCGACGCCCTGGCTCCCGTCCGTAGCGTGAGGCAGGAGCAGGTTCACACTAGCGTCGTGGGGACCCTGCTGGCAGAAATGGACGGGGTCTGTGACAGAGGTGAAGTAGTTGTTATCGGCGCAACGAATCGTCTGGACGCCGTGGACCCCGCACTGAGACGCGCCGGCCGGTTCGACCGCGAGCTGCACTTCCCCCCACCGCACGCGGCCGCGCGCCGCGAGATACTAGAGATATACACCCGCGACTGGAGCCCGCCCCCCTCCACAGACACCATACTGCGGATAGCCGACATCACTAACGGCTATGGAGGATCGGATCTGAAGGCTTTGTGTTCTGAGGCGGTACTGAAGGCGCTCAGAAGAGTTTATCCACAAGTGTACGATAGTGAATACGCGCTAGTTATAGATCCTAAAAACGTAGAGGTCACGGAAGGCGATCTGGAGTCAGCGATGGCTGGTTTGGTGGCGGCGGGCGCTCGGAGTAGTCCCGCCCCGGCGCGGCGACTACCCTCATATTGCGAGCCGCTGTTCCAGGCGCAACTTAGGGCTGCGTTATCCCTTCTCAAACAACCTTTCATTAAAGGCACTGGAAAAAAATCAGATATGCCGATGTCATCTAACGTGTTACTATTGGAGGGCGAATGTTCTGACACCCATCTCGCGCCCGCGGTGTTAGCCCACTTCGAACAGTGTACCGTTCGCGAGCTCAGTGTGGCGACTTTGCACTCGGCGCTGGCGTACACGCAAGAACAAGCGCTTATATCGCTGTTCTCGGAGTGTCGCCGCGCCGAGGGCGGGTGTGTGTTGGTAGTTCGTGAGGCGGACGCGGTGTGCGGCGCGCTGGGCGGGCCGGGGCTGCTGTTACAGCTGTGGCGCTCCCGGGCCGCGGGGGAGCGGACTTTACTCCTCGCTACCTCGCCACATAGACCGCTAGCTGATGATCTCAAAGAATTGTTCCCAGCATACAAAGACTGCACTTACAGAGTCCGCGATCCCACTATATCTGAAGTGATAAACTTCTTGAAGCCGATATTGACGGAAGTACCTCTAGAAGAACCCGTTATACAGAACAACGAGCCGCCGCCCCCTCTGCCACGAGCCCCTCCCCCTCCCCCGCCGAGAGAGAGCGAAGAAGATATAGCGAGGCGAAAAAGGAAAGAAGATTACAAGCTGAGAGAATTGAGGATATTTTTACGAGATATTTGCAGGAAGTTAGCTTCTAACAGGCGCTTTTATAAGTTCACCAAACCTGTCGATCTGGAGGAGGTCACAGACTATCTAGACATTATAAAGCAGCCGATGGATCTCGAGACCATAATGACGAAGGTGGACATGCACAAGTACAACTGTGCGCAGGAGTTCCTAGATGACGTGGACTTGATATGCGCCAACGCCCTCGAGTATAACCCGGACAGGACGTCGTCGGACAAGCAGATCCGTCATGAAGCGTGTTCCCTGAGAGATCACGCGCACGCGCTCATCGACGTGGAGATGGACAGCGACTTCGAGCTGGAGTGTCAGGACATCGCCCGGAGACGGCGCGAGGAGGGCGCCGCCGACAACGACCTGCCCGACTTCATATACACAGCATCCAACTTGCCGGACGGTCTTGATAATTCAACAAATGAGAAGACGATCCGAACACCACAGAACGGTGAGAAGAATGAGACTCACTCCGCGAAACGGAAGAGAAGAAGAATCAACGCCTGGTCCAAGGGACTGGTTGTGAAGCGGCAGAAAACACAGAGGAATTTTAAGGATTCATCACTGGCGGTGACGGACGAGGAGTGTAAGGAAAATCAGCCAATAACATCCACCCCGCTACCTAACGGGTCTTGTAGCTCGGGCTCCGACGACGACGCGCCTCTTAGACGACCCGCTCCCGACCCGCTCGAAAACAACGACAAAGACTATCACAACCACGTGCGGGACAGCCCGGCAAAAACTGAGAAGTCTCCGACTAAACAGTCACCAAAGAAAAGAAATTCCGGTCACGAGGCCTCGAGTGGAGATTCAGAGAAGGTACTGATAAACAAGACTGAACTAGATAACCTACTGTATAAAAACGCAAAGTCCTTAAGGAGCATCGGCCTCACTGCCTTACTCGATCTACACGAACAGCTGGCGGCCGTTGTCCACTCATACAGCGACAAATATGATAGGAACAAACTGCCAAACGAACTGAGCTCCATCATAACGAGGTACATACAGTTGGCGAAGAAGTGA

Protein sequence:

>DPOGS209720-PA
MVKTRRSNGENGEVDEGNYSINDVGSISDEKASNWSQRELRSSQYKVARKIQRWPTRYSRSRLRAIKMPRIMFPESDTEPEKYSRRSRQVRVFFADDNDASNRSMKIRRNRGPRKNYMEDSEDKPIQQNVRRSCRKRKLLHHNFNESWITNELKVKGYPDLYGFNGTSSSDEFSSGDEARESKKLTRSHPPTNTDEDTQLSRQRRTSARFTNNKKDVTDSDSDNENNQTVIEKKPVEAKQESDKNETEDKQKTEREEKAEVKEEQDSNSNQGPARSTRGRGRRGQKKDSHQETASSSSESSAPRARRPRRSERARAPPAFVQLADRETRTRGKSFALRKKPYSLRERKPKLLRRKTIRSQSPSSSSSSSSTSSSDTEEDLNVSMKNKTKGRQKSKCIDDKKTDRALRDIQPIEVDGSVRFSSVGGLEEHIKCLREMVLFPLMYPSLFEKFKTRPAKGVLFHGPPGTGKTLLARALANECSLIGGRKVAFFMRKGADCLKKWVGESERHLKLLFQQANKMKPSIIFFDEIDALAPVRSVRQEQVHTSVVGTLLAEMDGVCDRGEVVVIGATNRLDAVDPALRRAGRFDRELHFPPPHAAARREILEIYTRDWSPPPSTDTILRIADITNGYGGSDLKALCSEAVLKALRRVYPQVYDSEYALVIDPKNVEVTEGDLESAMAGLVAAGARSSPAPARRLPSYCEPLFQAQLRAALSLLKQPFIKGTGKKSDMPMSSNVLLLEGECSDTHLAPAVLAHFEQCTVRELSVATLHSALAYTQEQALISLFSECRRAEGGCVLVVREADAVCGALGGPGLLLQLWRSRAAGERTLLLATSPHRPLADDLKELFPAYKDCTYRVRDPTISEVINFLKPILTEVPLEEPVIQNNEPPPPLPRAPPPPPPRESEEDIARRKRKEDYKLRELRIFLRDICRKLASNRRFYKFTKPVDLEEVTDYLDIIKQPMDLETIMTKVDMHKYNCAQEFLDDVDLICANALEYNPDRTSSDKQIRHEACSLRDHAHALIDVEMDSDFELECQDIARRRREEGAADNDLPDFIYTASNLPDGLDNSTNEKTIRTPQNGEKNETHSAKRKRRRINAWSKGLVVKRQKTQRNFKDSSLAVTDEECKENQPITSTPLPNGSCSSGSDDDAPLRRPAPDPLENNDKDYHNHVRDSPAKTEKSPTKQSPKKRNSGHEASSGDSEKVLINKTELDNLLYKNAKSLRSIGLTALLDLHEQLAAVVHSYSDKYDRNKLPNELSSIITRYIQLAKK-