| DPOGS209751 | ||
|---|---|---|
| Transcript | DPOGS209751-TA | 744 bp |
| Protein | DPOGS209751-PA | 247 aa |
| Genomic position | DPSCF300314 - 125052-126642 | |
| RNAseq coverage | 567x (Rank: top 22%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL011915 | 1e-100 | 73.60% | |
| Bombyx | BGIBMGA005392-TA | 1e-58 | 83.85% | |
| Drosophila | REG-PA | 5e-100 | 72.69% | |
| EBI UniRef50 | UniRef50_E1ZYI1 | 2e-104 | 76.35% | Proteasome activator complex subunit 3 n=5 Tax=Pancrustacea RepID=E1ZYI1_CAMFO |
| NCBI RefSeq | XP_393883.2 | 2e-108 | 76.31% | PREDICTED: similar to REG CG1591-PA [Apis mellifera] |
| NCBI nr blastp | gi|350426714 | 2e-108 | 77.51% | PREDICTED: proteasome activator complex subunit 3-like [Bombus impatiens] |
| NCBI nr blastx | gi|350426714 | 2e-105 | 78.28% | PREDICTED: proteasome activator complex subunit 3-like [Bombus impatiens] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0008537 | 2.2e-127 | proteasome activator complex | |
| KEGG pathway | ame:410403 | 6e-108 | ||
| K06698 (PSME3) | maps-> | Proteasome | ||
| Antigen processing and presentation | ||||
| InterPro domain | [3-247] IPR009077 | 2.2e-127 | Proteasome activator pa28, REG alpha/beta subunit | |
| [98-247] IPR003186 | 2.5e-67 | Proteasome activator pa28, REG beta subunit | ||
| [3-62] IPR003185 | 3.6e-20 | Proteasome activator pa28, REG alpha subunit | ||
| Orthology group | MCL12461 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209751-TA
ATGACAGACGTGGCTAAGAAGGTTCAGGACTACAAGGACTCCCTCAAGCAGAAGGCTGAACACCTTATTATTAAAGGATTTCCAGAGAAAATTGTCAAATTGAATGAACTTCTTGAAACATCACATTTCCAAAACCGAGATCTCTCTGATGTCCATCAGGAATTAAACATTCCAGTACCTCCTCCTCTTAACACAAATTCACAAGATGAGCCATCGGCTAAACGACAGCGTTTAGATACATCTGAGGTATCAAGTGTGATGACTGTTGAGGGCACTATGGTTTATGCATTGCCAAATGGTACTGTACCATGTAACAAACCTCTAAGTGACCTTATACATCTCGTTAAACCACACATTAGGGAACTAGTTGAAGACTCAAACTTGCTTAAAATGTGGATATCATTTATGATCCCAAAAATAGAAGATGGTAACAATTTTGGTGTTTCAATACAAGAAGATACTTTAGCAGAGATTCAGTCAGTAGAATCTGAGGCAGCCGCTTTCTTTGATCAAATCTCACGGTATTTCATTTCAAGAGCTAAGATTGTATCAAAGGTTGCTAAATATCCACATATAGAAGACTATAGGAGAGCAGTTCAAGAACTAGATGAGAAGGAATATTTGTCATTATGGCTTGTCATGTGCGAGATCCGCAACCGTTATTGTTCGCTACACGATATTGTCATTAAGAATTTAGAGAAAATTAAGAAGCCGCGTTCGTCTAACGCCGAAACATTATACTAG
>DPOGS209751-PA
MTDVAKKVQDYKDSLKQKAEHLIIKGFPEKIVKLNELLETSHFQNRDLSDVHQELNIPVPPPLNTNSQDEPSAKRQRLDTSEVSSVMTVEGTMVYALPNGTVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSKVAKYPHIEDYRRAVQELDEKEYLSLWLVMCEIRNRYCSLHDIVIKNLEKIKKPRSSNAETLY-