| DPOGS209952 | ||
|---|---|---|
| Transcript | DPOGS209952-TA | 522 bp |
| Protein | DPOGS209952-PA | 173 aa |
| Genomic position | DPSCF300148 - 222828-229478 | |
| RNAseq coverage | 113x (Rank: top 59%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009682 | 1e-54 | 91.51% | |
| Bombyx | BGIBMGA011339-TA | 4e-21 | 93.48% | |
| Drosophila | tomosyn-PD | 4e-45 | 68.03% | |
| EBI UniRef50 | UniRef50_E2AK15 | 4e-46 | 71.55% | Syntaxin-binding protein 5 n=10 Tax=Neoptera RepID=E2AK15_CAMFO |
| NCBI RefSeq | XP_968585.2 | 2e-46 | 71.07% | PREDICTED: similar to tomosyn [Tribolium castaneum] |
| NCBI nr blastp | gi|350402776 | 6e-47 | 75.00% | PREDICTED: syntaxin-binding protein 5-like isoform 2 [Bombus impatiens] |
| NCBI nr blastx | gi|350402776 | 8e-44 | 75.00% | PREDICTED: syntaxin-binding protein 5-like isoform 2 [Bombus impatiens] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 3.6e-06 | protein binding | |
| KEGG pathway | ||||
| InterPro domain | [66-152] IPR011046 | 3.6e-06 | WD40 repeat-like-containing domain | |
| [74-152] IPR015943 | 3.6e-06 | WD40/YVTN repeat-like-containing domain | ||
| Orthology group | MCL30830 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209952-TA
ATGAGAGACCCTGTGTGTGTTTTAGTCTACGTGTGCGATAAGGGAGGACAGAACTCCGCTTTGCATCACAAAGTGTTCACCAAACTAAGAGACGAGCAAACAAGAGGTCTGCAGCCTCTCTGTGTGTACGATGTTAACTGTGGAGTCTGTGGACCGTGGGCCGTGGACGAGGGTCTTCTCGGTGGCCCTGGAGTGGATGCACATGTCCGCCACGAGTCCGGGGAGGCCGTGCTGCACGCCAAGTTCGTCATCAACGAAGGCGCCCTCGTCACGGCCACCGCAGACGACCAGCTCAACCTCTGGACCTTCCGGCAGAAGTTCCCGCAGAGGGTGCAGGCGCTCAAGTTCCAGAGAGAACGGATCACGTGTCTCCACCTGCCTCTTCAGTCCAAATGGATCCACGTGGGCACGGAGCGGGGGAACGTCCACGTCGTCAACATAGAGACCTTCGCGCTCAGCGGCTACGTCATCAACTGGAACAAGGCTATAGAAGTACCTGGTGCCGTCCCTGCGCTTCGCTGA
>DPOGS209952-PA
MRDPVCVLVYVCDKGGQNSALHHKVFTKLRDEQTRGLQPLCVYDVNCGVCGPWAVDEGLLGGPGVDAHVRHESGEAVLHAKFVINEGALVTATADDQLNLWTFRQKFPQRVQALKFQRERITCLHLPLQSKWIHVGTERGNVHVVNIETFALSGYVINWNKAIEVPGAVPALR-