DPOGS210004 | ||
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Transcript | DPOGS210004-TA | 432 bp |
Protein | DPOGS210004-PA | 143 aa |
Genomic position | DPSCF300327 - 82759-84029 | |
RNAseq coverage | 948x (Rank: top 13%) |
Annotation | ||||
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Heliconius | HMEL009871 | 2e-66 | 82.64% |   |
Bombyx | BGIBMGA008414-TA | 5e-43 | 80.41% |   |
Drosophila | CG3719-PA | 2e-33 | 51.47% |   |
EBI UniRef50 | UniRef50_Q16V30 | 1e-36 | 56.30% | Thioredoxin n=3 Tax=Culicidae RepID=Q16V30_AEDAE |
NCBI RefSeq | XP_974436.2 | 3e-40 | 67.80% | PREDICTED: similar to thioredoxin (AGAP003338-PA) [Tribolium castaneum] |
NCBI nr blastp | gi|189236262 | 8e-39 | 67.80% | PREDICTED: similar to thioredoxin (AGAP003338-PA) [Tribolium castaneum] |
NCBI nr blastx | gi|332375018 | 5e-40 | 65.38% | unknown [Dendroctonus ponderosae] |
Group | ||||
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Gene Ontology | GO:0015035 | 2.8e-30 | protein disulfide oxidoreductase activity | |
GO:0009055 | 2.8e-30 | electron carrier activity | ||
GO:0006662 | 2.8e-30 | glycerol ether metabolic process | ||
GO:0045454 | 2.8e-30 | cell redox homeostasis | ||
KEGG pathway |   | |||
InterPro domain | [24-135] IPR005746 | 2.8e-30 | Thioredoxin | |
[30-138] IPR012336 | 4.8e-28 | Thioredoxin-like fold | ||
[36-133] IPR013766 | 5.4e-20 | Thioredoxin domain | ||
Orthology group | MCL16500 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210004-TA
ATGAATAATGCCATCTGTCAAGGACTGCGGTCACCAGTTCGGAGGCTCGCTGGTCTAAGAAATAAACTTATATCAACATCTGTTGTCCACAATGAGACCATTCTAGTCAAGAATTACGATGATTTCGTAAATAAGGTGATGAATAACGAGAAACCTGTGATAGTGAACTTCCACGCGGAGTGGTGTGAGCCGTGCAAGATCCTCACGCCGAAGCTCAAGGAGTTGGTTGAACCGTTCACTTCGCTGGATCTCGCCATAGTCGACGTGGAAGACAACGCGGAGCTAGTTCACACTTTTGAGGTGAAAGCGGTACCGGCGGTTATAGCCATCAGGAATAGTCTCATAGTGGACAAATTCATCGGCCTTGTGGACACGGACATGATCAACAGTCTCATAGAACGGATGGCGGGGAAACGGAATAATGGCGCGTAA
>DPOGS210004-PA
MNNAICQGLRSPVRRLAGLRNKLISTSVVHNETILVKNYDDFVNKVMNNEKPVIVNFHAEWCEPCKILTPKLKELVEPFTSLDLAIVDVEDNAELVHTFEVKAVPAVIAIRNSLIVDKFIGLVDTDMINSLIERMAGKRNNGA-