Monarch geneset OGS2.0

DPOGS210093
TranscriptDPOGS210093-TA612 bp
ProteinDPOGS210093-PA203 aa
Genomic positionDPSCF300017 + 576801-578088
RNAseq coverage1421x (Rank: top 9%)
Annotation
HeliconiusHMEL0154732e-10297.04% 
BombyxBGIBMGA012673-TA7e-9896.43% 
DrosophilaChmp1-PA2e-9188.18% 
EBI UniRef50UniRef50_Q7LBR14e-6675.13%Charged multivesicular body protein 1b n=118 Tax=Eukaryota RepID=CHM1B_HUMAN
NCBI RefSeqNP_001040238.13e-10197.04%chromatin modifying protein 1b [Bombyx mori]
NCBI nr blastpgi|1140523385e-10097.04%chromatin modifying protein 1b [Bombyx mori]
NCBI nr blastxgi|1140523382e-10297.04%chromatin modifying protein 1b [Bombyx mori]
Group
Gene OntologyGO:00150316.7e-35protein transport
KEGG pathwaydan:Dana_GF108091e-98 
 K12197 (CHMP1, VPS46, DID2)maps-> Endocytosis
InterPro domain[11-174] IPR0050246.7e-35Snf7
Orthology groupMCL14761 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS210093-TA
ATGTCATCGTCTGCTATGGAAAAGCACCTATTTAATTTAAAATTTGCTGTAAAAGAACTAGAACGAAATTCAAAGAAATGCGAAAAAGAAGAGAAGTTAGAAAAGGACAAGGCAAAGAAAGCCATACAAAAGGGTAATATGGAAGTTGCTAGAATACATGCCGAAAATGCTATAAGACAAAAGAATCAAGCTATTAATTACCTCAGAATGTCTGCAAGGGTTGATGCTGTGTCTAGTAGAGTGCAGACCGCTCTTACTACACGGAAGGTAACAAATTCAATGGCGGGAGTTGTGAAAGCAATGGATGCTGCAATGAAATCAATGAATCTTGAGAAGATATCCACTCTGATGGACAAATTTGAGAGTCAGTTTGAGGATCTGGATGTTCAGTCATCATACATGGAGAATGCAATGTCACAAACGACTACAACAACAGTACCTCAGGGTGACGTTGAAAAGCTGTTACAGCAAGTCGCTGACGAGGCTGGCTTGGAGTTGAACATGGAACTGCCATCCGGGGTCCCCAGCACGTCGGTCGGTACAGCCACAGTAGTTTCTCAAGAACAGGATGAACTTACTCAAAGACTGGCTAGGCTTAGACAAGCTGAATAA

Protein sequence:

>DPOGS210093-PA
MSSSAMEKHLFNLKFAVKELERNSKKCEKEEKLEKDKAKKAIQKGNMEVARIHAENAIRQKNQAINYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKAMDAAMKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVEKLLQQVADEAGLELNMELPSGVPSTSVGTATVVSQEQDELTQRLARLRQAE-