DPOGS210276 | ||
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Transcript | DPOGS210276-TA | 471 bp |
Protein | DPOGS210276-PA | 156 aa |
Genomic position | DPSCF300216 + 142604-143247 | |
RNAseq coverage | 888x (Rank: top 14%) |
Annotation | ||||
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Heliconius | HMEL008624 | 2e-82 | 94.87% |   |
Bombyx | BGIBMGA000029-TA | 9e-81 | 91.03% |   |
Drosophila | NHP2-PA | 1e-50 | 58.39% |   |
EBI UniRef50 | UniRef50_Q9V3U2 | 1e-48 | 58.39% | H/ACA ribonucleoprotein complex subunit 2-like protein n=27 Tax=Pancrustacea RepID=NHP2_DROME |
NCBI RefSeq | NP_001040438.1 | 2e-79 | 91.03% | nucleolar protein family A member 2 [Bombyx mori] |
NCBI nr blastp | gi|114051934 | 4e-78 | 91.03% | nucleolar protein family A member 2 [Bombyx mori] |
NCBI nr blastx | gi|114051934 | 3e-78 | 91.03% | nucleolar protein family A member 2 [Bombyx mori] |
Group | ||||
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KEGG pathway |   | |||
InterPro domain | [47-141] IPR004038 | 1.2e-23 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 | |
[63-77] IPR018492 | 8e-12 | Ribosomal protein L7Ae/L8/Nhp2 family | ||
Orthology group | MCL14350 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210276-TA
ATGGGAAAAGTAAAACAAGAACCAGTGGAACAGGAAGAGGCAGGAGACGTAAGCATCAAGTCTGAACCACAAAGTTACGATGAGAAAGTCGAACACTGCAGTGTTATAGCTAAGCCGATGGCGTCAAAGAAACTTAGTAAAAAGATTTACAAACTCATAAAAAAATCCAGTAGCCATAAGAATTATATAAGAAACGGGTTAAAAATTGTCCAGAAACAATTGCGTCTTGGAGAAAAAGGTATTGTTGTATTTGCTGGTGATATCTCGCCAATTGAGATCATGTGCCACTTGCCTGCTGTTTGTGAAGAGAAAGACGTCCCCTATTGTTACACACCAAGCCGTAAGGACATAGGATCAGCCATGGGCACCATGAGAGGATGCATTATGGTACTCGTAAAGGAACATGAAGAGTATAAAGATTTATATGAAGAAGTAAAAAGCGAAATTAAATTACTTGGACATCCATTATAG
>DPOGS210276-PA
MGKVKQEPVEQEEAGDVSIKSEPQSYDEKVEHCSVIAKPMASKKLSKKIYKLIKKSSSHKNYIRNGLKIVQKQLRLGEKGIVVFAGDISPIEIMCHLPAVCEEKDVPYCYTPSRKDIGSAMGTMRGCIMVLVKEHEEYKDLYEEVKSEIKLLGHPL-