Monarch geneset OGS2.0

DPOGS210307
TranscriptDPOGS210307-TA2367 bp
ProteinDPOGS210307-PA788 aa
Genomic positionDPSCF300305 + 162174-174418
RNAseq coverage61x (Rank: top 68%)
Annotation
HeliconiusHMEL0028780.072.86% 
BombyxBGIBMGA014000-TA0.071.28% 
DrosophilaLrt-PB2e-8443.91% 
EBI UniRef50UniRef50_D6WUA18e-12137.45%Cys-loop ligand-gated ion channel subunit-like protein n=3 Tax=Tribolium castaneum RepID=D6WUA1_TRICA
NCBI RefSeqXP_971643.15e-12437.56%PREDICTED: similar to CG11136 CG11136-PA [Tribolium castaneum]
NCBI nr blastpgi|910865151e-12237.56%PREDICTED: similar to CG11136 CG11136-PA [Tribolium castaneum]
NCBI nr blastxgi|910865156e-12337.61%PREDICTED: similar to CG11136 CG11136-PA [Tribolium castaneum]
Group
KEGG pathway 
InterPro domain[368-420] IPR0004836.2e-08Cysteine-rich flanking region, C-terminal domain
Orthology groupMCL15683 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS210307-TA
ATGTGGCTAACCGGGGCGCTGTCAATACTGTGTCTTTCAAGCGTGCTGTCTGATTGGCATTGCCCAGAAATAAGCTCTCGTCCTTTAGCTGAATGCTCCTGCGATTTACCTCATACTTTAAGATGCACTGGCGACCATAATGCTTTACAGATAATTGGTCGTCACTTAAGAGAGCAGAGAGCTAGAAACAAAAATACAGCTGTATCTTTGCTTGATTGTGCTTTACGAGGCTTGTCTTCTTTGACATCCGCGTCGGTATCTGAACTGGCGGGGGTTGGCTTACACGGCCTGGTTATATCATCTGGAGATATTAAACGAGTGCAGTCTGGAGCTTTCAATAGCATATCATCAACTTTACTAGCCTTGGGTTTACCTAACAATCAATTGCCGTTAGTACCGACAGAAGCAATAGTACGTTTGGTACATCTAGATCGTTTGGATCTTTCAAATAATAAAATTCACACTTTGGATGCGAATTCGTTCAAGGGAGTACATAATCTTACTTACCTTGACATAAGTGATAACCAGTTGACAAGCATTGCTGATGGAGCTTTTCAACCTTTGATTAAACTGAATGTGTTGAGGTTAAGGGGTAATCTACTTAAAGTTTCCGCTTTGACAGCTTTAAAGGAAGCGAACATGTTAAAAGAACTTGATGTATCCAGTAATGCCTTAGAAGGACCTGTAGGTCCGTCGACAGTGCCTTCACTAAGCTATTTGGAGACTCTTCATTTATCAGATAATACTTTTGCGAGTATACGACGTGGGGCTCTTGCAGGTCTTACAAATTTGACTTTATTGAATCTACATAACAACCAAATAGATGTGCTTGAAGATTACGCGTTTAAACATTTAACTAACTTGTCTCATTTGGATTTGTCTCATAATGAAATTGTAGCTGTCTCCGGTGCTTCATTAGCTCAACTAGCAAATTTGGCGTATTTGGATTTATCTCACAATTTCCTCCGATCATTGTCAGCTGACCCACTCAAAGCTCTCAATCGTTTAACAAATCTTCTTCTTCATGACAACGACATATCTATGATCGAAGATGGTGCTCTAACACTCCACAAAGACCTGCGAAGATTCACTATCGAAGATAATCCACTTAATTGCGATTGCTTAATGGCCGGCTTTGCGAGGTGGTTGCGGGAGGCAAAAAATCTGCCTCAATCTGATAAATCAGCCGCAGTTTGTGCCACGCCACCTCATTTGGAAGGAGCATTAATTTCCCGACTATCTAAAAACAAGCTATGTGACGATGACCACGTTGAGAATCAAAAAGCTATAGATCAAGCGAACTATGATTATAACAAAGTAGATGATAATATTATAGATGAAGATAAAATTGATGATTTATTGTATGGTGAAAAAATTGATGGATTGGATGATGATGCTTATGACGAGGAAATGGAAGTTCCCGGGGAAGAAGATCTGCCGATATCTAAGTCAACGGTGCGTTTGATGGATGCGTGGTATGATGATGAAGAAGTACATTTGTCCTGGACAATAGAACCCCTCTCGACTCTTCGATATCGGTGCACAGGTGTGACAGCTTCCAAGGCTGGTGGTCTTCCCAAACATATCGCCTGCCATAGAGCACCACCAGCCAATATCGTGTTAAGAGGTTTTAAAATTGATCCCTTAGAAAAGTATACTTTTTGTGTGGCTCTGGAAGAAATGGATACCAAAGATATGCCCATAGCCTTAGTTTTGGGCTGTGGGACACCATCTCTGGTTAGACAACGAGTAGAATATGTCACAGTACGCTCTGAACCCATTACTGTGCCCATATTAGAACCTATAAGAGTCTCCGAAGTGCGATCTAACATCACCAGCGATGGATTGCTAACTGTCCTAATATCCGTTTTGGGAATACCGCCTCCAAAGCAATACGTTTTACCAAGATCCCAAAGAGTGTCAATGCCCGACAGATATCTACACAATTGCTATGTAATTCTAGCAGTTCTGGATAGAGGGTCCTTAGTGGCCCAAAAAGATACGCCGTGTCAGGATACCTTGGAAGTAACAATGGAAGGCTTTGTAAGAGGTCCATATGAAGTATGTGCAACCATTTCCAAGTTAAAAACAGACAGTGTACATAAAATTTGCATTGTCCCACAACTTTTAGAACCAGTTGGATCTTTACAAATGAAGACCGGACTTAAAAATCTAAACACGGCTCTAGTGGGACTTGCTTTAGGACTAATGATTATCGTTATAGCTCTTGTATGGTTTGTTAGAAAGATGTTGAAAAAACCTACAGAATTTCAAACCCATAGATGTTTCAGGCCTGAGCCAGTGGCAGAGGAAAATACAAGAGCTAGTTACGTAATGTTGACAACTACAGCTACATCTAAAGTATGA

Protein sequence:

>DPOGS210307-PA
MWLTGALSILCLSSVLSDWHCPEISSRPLAECSCDLPHTLRCTGDHNALQIIGRHLREQRARNKNTAVSLLDCALRGLSSLTSASVSELAGVGLHGLVISSGDIKRVQSGAFNSISSTLLALGLPNNQLPLVPTEAIVRLVHLDRLDLSNNKIHTLDANSFKGVHNLTYLDISDNQLTSIADGAFQPLIKLNVLRLRGNLLKVSALTALKEANMLKELDVSSNALEGPVGPSTVPSLSYLETLHLSDNTFASIRRGALAGLTNLTLLNLHNNQIDVLEDYAFKHLTNLSHLDLSHNEIVAVSGASLAQLANLAYLDLSHNFLRSLSADPLKALNRLTNLLLHDNDISMIEDGALTLHKDLRRFTIEDNPLNCDCLMAGFARWLREAKNLPQSDKSAAVCATPPHLEGALISRLSKNKLCDDDHVENQKAIDQANYDYNKVDDNIIDEDKIDDLLYGEKIDGLDDDAYDEEMEVPGEEDLPISKSTVRLMDAWYDDEEVHLSWTIEPLSTLRYRCTGVTASKAGGLPKHIACHRAPPANIVLRGFKIDPLEKYTFCVALEEMDTKDMPIALVLGCGTPSLVRQRVEYVTVRSEPITVPILEPIRVSEVRSNITSDGLLTVLISVLGIPPPKQYVLPRSQRVSMPDRYLHNCYVILAVLDRGSLVAQKDTPCQDTLEVTMEGFVRGPYEVCATISKLKTDSVHKICIVPQLLEPVGSLQMKTGLKNLNTALVGLALGLMIIVIALVWFVRKMLKKPTEFQTHRCFRPEPVAEENTRASYVMLTTTATSKV-