| DPOGS210319 | ||
|---|---|---|
| Transcript | DPOGS210319-TA | 213 bp |
| Protein | DPOGS210319-PA | 70 aa |
| Genomic position | DPSCF300025 - 917165-917604 | |
| RNAseq coverage | 89702x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | BGIBMGA011948-TA | 2e-28 | 100.00% | |
| Drosophila | RpS28b-PA | 1e-24 | 83.33% | |
| EBI UniRef50 | UniRef50_Q9W334 | 2e-22 | 83.33% | 40S ribosomal protein S28 n=161 Tax=cellular organisms RepID=RS28_DROME |
| NCBI RefSeq | NP_001037680.1 | 7e-27 | 100.00% | 40S ribosomal protein S28 [Bombyx mori] |
| NCBI nr blastp | gi|112982910 | 2e-25 | 100.00% | 40S ribosomal protein S28 [Bombyx mori] |
| NCBI nr blastx | gi|112982910 | 6e-25 | 100.00% | 40S ribosomal protein S28 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 7.9e-43 | ribosome | |
| GO:0006412 | 7.9e-43 | translation | ||
| GO:0005622 | 7.9e-43 | intracellular | ||
| GO:0003735 | 7.9e-43 | structural constituent of ribosome | ||
| KEGG pathway | tca:659616 | 1e-23 | ||
| K02979 (RP-S28e, RPS28) | maps-> | Ribosome | ||
| InterPro domain | [1-59] IPR000289 | 7.9e-43 | Ribosomal protein S28e | |
| [2-62] IPR012340 | 9.6e-29 | Nucleic acid-binding, OB-fold | ||
| [2-67] IPR016027 | 2.3e-21 | Nucleic acid-binding, OB-fold-like | ||
| Orthology group | MCL14671 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210319-TA
ATGGATAAACCTAACGTTCTCGCTCGCGTTGTTAAGGTCCTGGGCCGTACCGGTTCCCAGGGACAATGTACTCAGGTCAAAGTTGAGTTCATCGGAGAGACCAGCCGTCAAATTATCAGAAACGTGAAAGGACCGGTCAGAGACGGAGACATCCTCACGCTGTTGGAATCTGAGCGGTGTGGAGAAACTACTAGGTTAAGCTCTTACATGTAA
>DPOGS210319-PA
MDKPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILTLLESERCGETTRLSSYM-