| DPOGS210325 | ||
|---|---|---|
| Transcript | DPOGS210325-TA | 465 bp |
| Protein | DPOGS210325-PA | 154 aa |
| Genomic position | DPSCF300025 - 677117-688059 | |
| RNAseq coverage | 1010x (Rank: top 13%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008905 | 9e-41 | 97.40% | |
| Bombyx | BGIBMGA011963-TA | 4e-39 | 91.36% | |
| Drosophila | CG7220-PE | 2e-70 | 80.95% | |
| EBI UniRef50 | UniRef50_Q96B02 | 2e-65 | 74.00% | Ubiquitin-conjugating enzyme E2 W n=93 Tax=Eukaryota RepID=UBE2W_HUMAN |
| NCBI RefSeq | XP_974790.1 | 4e-78 | 87.66% | PREDICTED: similar to AGAP005324-PB [Tribolium castaneum] |
| NCBI nr blastp | gi|91079008 | 7e-77 | 87.66% | PREDICTED: similar to AGAP005324-PB [Tribolium castaneum] |
| NCBI nr blastx | gi|91079008 | 2e-77 | 87.66% | PREDICTED: similar to AGAP005324-PB [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016881 | 1e-35 | acid-amino acid ligase activity | |
| KEGG pathway | tca:663661 | 1e-77 | ||
| K10688 (UBE2W, UBC16) | maps-> | Ubiquitin mediated proteolysis | ||
| InterPro domain | [3-124] IPR016135 | 6.2e-43 | Ubiquitin-conjugating enzyme/RWD-like | |
| [10-145] IPR000608 | 1e-35 | Ubiquitin-conjugating enzyme, E2 | ||
| Orthology group | MCL12647 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210325-TA
ATGGCGGCTATGTCCCCGTCGGAGCGACGTTTACAGAAAGAGCTTATGTCGTTGATGAAGGAACCTCCACCAGGTGTCACGGTTGACGGAGACCAGGCCAGCCAAAATCTGACACTGTGGACAGTTCACATGGAAGGTGTCCCCGGAACACTTTACGAGGGTGAAAAATTTGTATTGCAGTTTAAATTCACTAATAAATATCCCTTCGATTCGCCTGAGGTGACCTTCGTGGGTAACAATATCCCGGTCCACCCGCACGTGTACTCCAACGGCCACATCTGTTTGTCCATCCTCACCGACGACTGGTCGCCGGCGCTCTCCGTACAGTCCGTCTGTCTCTCGATAGTTTCCATGCTCAGTAGCTGTAAGGAGAAGAAACGGCCGCCGGATAATTCGTTTTACGTTAAGACATGCAACAAAAACCCCAAAAAAACGAAATGGTGGTACCATGATGATTCAGTTTAA
>DPOGS210325-PA
MAAMSPSERRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPEVTFVGNNIPVHPHVYSNGHICLSILTDDWSPALSVQSVCLSIVSMLSSCKEKKRPPDNSFYVKTCNKNPKKTKWWYHDDSV-