Monarch geneset OGS2.0

DPOGS210329
TranscriptDPOGS210329-TA1617 bp
ProteinDPOGS210329-PA538 aa
Genomic positionDPSCF300025 - 625628-631009
RNAseq coverage310x (Rank: top 36%)
Annotation
HeliconiusHMEL0138480.083.18% 
BombyxBGIBMGA011966-TA0.083.67% 
DrosophilaCG6550-PA0.065.01% 
EBI UniRef50UniRef50_Q5VV420.063.67%CDK5 regulatory subunit-associated protein 1-like 1 n=108 Tax=Eukaryota RepID=CDKAL_HUMAN
NCBI RefSeqXP_970283.10.070.76%PREDICTED: similar to GA19679-PA [Tribolium castaneum]
NCBI nr blastpgi|3231000400.081.18%MiaB-like protein 1 [Plutella xylostella]
NCBI nr blastxgi|3231000400.081.18%MiaB-like protein 1 [Plutella xylostella]
Group
Gene OntologyGO:00515396.8e-1034 iron, 4 sulfur cluster binding
GO:00434126.8e-103macromolecule modification
GO:00167406.8e-103transferase activity
GO:00038243e-40catalytic activity
GO:00515363e-40iron-sulfur cluster binding
GO:00094515.4e-17RNA modification
KEGG pathway 
InterPro domain[2-512] IPR0239703.2e-221Methylthiotransferase/B12-binding/radical SAM-type
[63-490] IPR0064665.4e-152MiaB-like tRNA modifying enzyme, archaeal-type
[62-487] IPR0058396.8e-103Methylthiotransferase
[206-426] IPR0234043.7e-58Radical SAM, alpha/beta horseshoe
[199-420] IPR0066383e-40Elongator protein 3/MiaB/NifB
[207-378] IPR0071978e-19Radical SAM
[63-141] IPR0138485.4e-17Methylthiotransferase, N-terminal
[431-489] IPR0027926.7e-07Deoxyribonuclease/rho motif-related TRAM
Orthology groupMCL13220 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS210329-TA
ATGCCAGGTGCCGTATCGGAGTTTATTGATGATATTGAGGATTTAATATCTTCACAGGATATCACACCAAAAGAAAGATACGCCAGTAGGAAAAGTGTAAGCGTCCGGTCAAAAAAGAAAGAAAAAAAGGAGACGGAATGTGTTGAGAAGGTTATTTTGGAGAGTGTTGTACCAGGAACTCAAACAATTTACGTGAAGACATGGGGCTGTGCACACAACAACTCGGATTCAGAGTATATGGCAGGTCTACTGGCTGCACATGGCTACAAACTGACGGAAGACAAGTTTTCTGCACAGCTATGGCTGCTGAACTCTTGTACTGTGAAGAGCCCTGCTGAAGACCATTTTAAGAATGAGATTGAACTGGCTCAGAAGCGCGGTATCCACTTGGTGTTAGCCGGATGTGTGCCGCAGGGAGCACCACGCTCGGGATATCTTGCGGGACTGAGTGTGGTCGGAGTACACCAGATTGATAGAATCGTTGAGATCGTTGAGGAAACATTGAAAGGTCACACAGTGCGTCTTTTTGGTCAAAAGAAAACGGAGGAGGGTCGGAAGGCGGGCGGGGCTTCTTTGTTGCTCCCGAAAGTGAGGAAAAATCCCCTCATAGAGATCATACCGATAAATACAGGGTGTTTGAACCAGTGTACATACTGTAAAACGAAACACGCGAGGGGCGAGCTGGGGAGTTATCCTCCAGAGGAAATAGTCGAGAGGGCGACACAGTCTTTCAAGGAGGGAGTGTGCGAAATATGGCTGACTAGCGAAGACACGGGAACATACGGTCGGGACATAGGCACGTCCCTCCCATACCTCCTCAAACAGCTGGTGGCCGTCATTCCTGAGGGCTGTCGTCTTCGCCTGGGTATGACGAACCCGCCCTATATCCTGGAGCACCTGGCCGAGGTCGCCGAGATCATGCACCATCCCAGGGTATATAAGTTCCTCCACGTGCCGGTTCAGTCCGGGAGTGACCAGGTGTTGGCCGACATGAAGAGGGAGTACTCCAGGAAGGACTTCGAGAGGGTCGTGGACTACCTCGCAGAGAGGGTCCCCGGGATCACGATAGCCACGGACATCATCTGCGGGTTCCCGACGGAGACGGACGCGGACTTCGAGGATACCATGCAGCTCTGTATGAAGTATCGCTTCTCATCGCTCTTCATCAACCAGTTCTTCCCTCGCCCGGGCACGCCGGCCGCTAACATGACACGAGTCCCGCCTCAAGACGTCAAGAAAAGGACGAAGAAATTATCGGAATTCTTCCGCTCGTATGAACCTTACGGTCACAAGGTGGGCGAGATACAGGAGGTTCTGGTGACGGATGTGTCCCACGACAAAAACTATTACGTGGCACACAACGAGTTCTACGAACAGGTGCTGGTGCCCAAGGAGGAGAGATACATGGGGAAGCTGGTTACGGTCAGAATAACGAGCGCCTCGAAGTTCTCCATGATGGGACACCCTGTAGATAAACCCAAAATGCCCGGCTTAGTGAAACCGTTGAAGAAAGGGGAAGTGTCGGGTTATTGGAAACAAAGCAAGGCCTCGCTTCCTGTGCCCATACTTATGTTACTAATAGCCGTCGTCGCACGCTTGTTATGGATGTTTATATAG

Protein sequence:

>DPOGS210329-PA
MPGAVSEFIDDIEDLISSQDITPKERYASRKSVSVRSKKKEKKETECVEKVILESVVPGTQTIYVKTWGCAHNNSDSEYMAGLLAAHGYKLTEDKFSAQLWLLNSCTVKSPAEDHFKNEIELAQKRGIHLVLAGCVPQGAPRSGYLAGLSVVGVHQIDRIVEIVEETLKGHTVRLFGQKKTEEGRKAGGASLLLPKVRKNPLIEIIPINTGCLNQCTYCKTKHARGELGSYPPEEIVERATQSFKEGVCEIWLTSEDTGTYGRDIGTSLPYLLKQLVAVIPEGCRLRLGMTNPPYILEHLAEVAEIMHHPRVYKFLHVPVQSGSDQVLADMKREYSRKDFERVVDYLAERVPGITIATDIICGFPTETDADFEDTMQLCMKYRFSSLFINQFFPRPGTPAANMTRVPPQDVKKRTKKLSEFFRSYEPYGHKVGEIQEVLVTDVSHDKNYYVAHNEFYEQVLVPKEERYMGKLVTVRITSASKFSMMGHPVDKPKMPGLVKPLKKGEVSGYWKQSKASLPVPILMLLIAVVARLLWMFI-