| DPOGS210406 | ||
|---|---|---|
| Transcript | DPOGS210406-TA | 441 bp |
| Protein | DPOGS210406-PA | 146 aa |
| Genomic position | DPSCF300558 - 12458-13472 | |
| RNAseq coverage | 252x (Rank: top 42%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL022551 | 4e-54 | 66.90% | |
| Bombyx | BGIBMGA001679-TA | 4e-37 | 70.97% | |
| Drosophila | CG3893-PA | 2e-09 | 27.91% | |
| EBI UniRef50 | UniRef50_B0WM12 | 5e-17 | 36.76% | Putative uncharacterized protein n=2 Tax=Culicinae RepID=B0WM12_CULQU |
| NCBI RefSeq | XP_001849746.1 | 8e-18 | 36.76% | conserved hypothetical protein [Culex quinquefasciatus] |
| NCBI nr blastp | gi|170044205 | 2e-16 | 36.76% | conserved hypothetical protein [Culex quinquefasciatus] |
| NCBI nr blastx | gi|170044205 | 2e-17 | 38.35% | conserved hypothetical protein [Culex quinquefasciatus] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ame:413757 | 5e-12 | ||
| K02728 (PSMA4) | maps-> | Proteasome | ||
| InterPro domain | [11-135] IPR007917 | 1.4e-14 | Uncharacterised protein family UPF0224 | |
| [41-66] IPR022776 | 4.8e-08 | TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain | ||
| Orthology group | MCL10275 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210406-TA
ATGGCGGCCCCCGCACCACATCAGATGACAACCTGTCCATACAATAAAGCACATCAAGTAGAGCATTACCGAATGCACATCCACCTTCAGAAGTGTCGTAAACAGCACCCTAATTGCAACAAAATGACCTGCCCGTTTGATACCACACACGTCGTAAATGACGTAGAATTAGATTACCACATATCGGTGTGCCCCAAACGTGAAATGCTAGACTCACAGATGTATGTCATTGACAATGATCACCGTCCTCAAGTTGAAGTTACAGCACCGACTCATGTGCCGTGCGAAGAAAATTGGGAGGACTCGAATGTGACGTCCTATCAACCAGATCTAGCTAAGAAAAGTCATCATATTATAATGAAAGTTAAAGGTGCAACTCCGTCGGAGAGACGGAAGGCTAGAATGGAAGCCATCAAGACATACAGGGGCTCGGAGAATTGA
>DPOGS210406-PA
MAAPAPHQMTTCPYNKAHQVEHYRMHIHLQKCRKQHPNCNKMTCPFDTTHVVNDVELDYHISVCPKREMLDSQMYVIDNDHRPQVEVTAPTHVPCEENWEDSNVTSYQPDLAKKSHHIIMKVKGATPSERRKARMEAIKTYRGSEN-