DPOGS210423 | ||
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Transcript | DPOGS210423-TA | 240 bp |
Protein | DPOGS210423-PA | 79 aa |
Genomic position | DPSCF300062 - 497077-497767 | |
RNAseq coverage | 1131x (Rank: top 11%) |
Annotation | ||||
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Heliconius | HMEL007581 | 2e-36 | 86.08% |   |
Bombyx | BGIBMGA008650-TA | 1e-24 | 61.11% |   |
Drosophila | Cks30A-PA | 3e-31 | 79.45% |   |
EBI UniRef50 | UniRef50_Q24152 | 6e-29 | 79.45% | Cyclin-dependent kinases regulatory subunit n=103 Tax=Eukaryota RepID=CKS1_DROME |
NCBI RefSeq | XP_975644.1 | 3e-32 | 79.75% | PREDICTED: similar to CDC28 protein kinase 1-like protein [Tribolium castaneum] |
NCBI nr blastp | gi|91087377 | 8e-31 | 79.75% | PREDICTED: similar to CDC28 protein kinase 1-like protein [Tribolium castaneum] |
NCBI nr blastx | gi|91087377 | 6e-33 | 82.89% | PREDICTED: similar to CDC28 protein kinase 1-like protein [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0016538 | 6.2e-39 | cyclin-dependent protein kinase regulator activity | |
GO:0007049 | 6.2e-39 | cell cycle | ||
KEGG pathway | tca:664555 | 1e-31 |   | |
  | K02219 (CKS1) | maps-> | Small cell lung cancer | |
  |   |   | Pathways in cancer | |
  |   |   | Cell cycle - yeast | |
InterPro domain | [4-72] IPR000789 | 6.2e-39 | Cyclin-dependent kinase, regulatory subunit | |
Orthology group | MCL16982 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210423-TA
ATGTCTAGGGATATTTACTATTCCGAAAAATATTACGACGAAGAACATGAATACAGGCACGTCGTATTGCCAAAAGAGATGGTGAAGTTAGTGCCTAAAAACCATTTGATGTCGGAGCAGGAGTGGCGAGGTATAGGTGTGCAGCAAAGTCAAGGATGGGTGCACTACATGACACATCAACCTGAACCCCATATCCTTCTTTTCCGAAGAAAGAAGACGACTCCACCAGAGAAAAAGTAA
>DPOGS210423-PA
MSRDIYYSEKYYDEEHEYRHVVLPKEMVKLVPKNHLMSEQEWRGIGVQQSQGWVHYMTHQPEPHILLFRRKKTTPPEKK-