| DPOGS210423 | ||
|---|---|---|
| Transcript | DPOGS210423-TA | 240 bp |
| Protein | DPOGS210423-PA | 79 aa |
| Genomic position | DPSCF300062 - 497077-497767 | |
| RNAseq coverage | 1131x (Rank: top 11%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007581 | 2e-36 | 86.08% | |
| Bombyx | BGIBMGA008650-TA | 1e-24 | 61.11% | |
| Drosophila | Cks30A-PA | 3e-31 | 79.45% | |
| EBI UniRef50 | UniRef50_Q24152 | 6e-29 | 79.45% | Cyclin-dependent kinases regulatory subunit n=103 Tax=Eukaryota RepID=CKS1_DROME |
| NCBI RefSeq | XP_975644.1 | 3e-32 | 79.75% | PREDICTED: similar to CDC28 protein kinase 1-like protein [Tribolium castaneum] |
| NCBI nr blastp | gi|91087377 | 8e-31 | 79.75% | PREDICTED: similar to CDC28 protein kinase 1-like protein [Tribolium castaneum] |
| NCBI nr blastx | gi|91087377 | 6e-33 | 82.89% | PREDICTED: similar to CDC28 protein kinase 1-like protein [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016538 | 6.2e-39 | cyclin-dependent protein kinase regulator activity | |
| GO:0007049 | 6.2e-39 | cell cycle | ||
| KEGG pathway | tca:664555 | 1e-31 | ||
| K02219 (CKS1) | maps-> | Small cell lung cancer | ||
| Pathways in cancer | ||||
| Cell cycle - yeast | ||||
| InterPro domain | [4-72] IPR000789 | 6.2e-39 | Cyclin-dependent kinase, regulatory subunit | |
| Orthology group | MCL16982 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210423-TA
ATGTCTAGGGATATTTACTATTCCGAAAAATATTACGACGAAGAACATGAATACAGGCACGTCGTATTGCCAAAAGAGATGGTGAAGTTAGTGCCTAAAAACCATTTGATGTCGGAGCAGGAGTGGCGAGGTATAGGTGTGCAGCAAAGTCAAGGATGGGTGCACTACATGACACATCAACCTGAACCCCATATCCTTCTTTTCCGAAGAAAGAAGACGACTCCACCAGAGAAAAAGTAA
>DPOGS210423-PA
MSRDIYYSEKYYDEEHEYRHVVLPKEMVKLVPKNHLMSEQEWRGIGVQQSQGWVHYMTHQPEPHILLFRRKKTTPPEKK-