| DPOGS210558 | ||
|---|---|---|
| Transcript | DPOGS210558-TA | 510 bp |
| Protein | DPOGS210558-PA | 169 aa |
| Genomic position | DPSCF300304 + 151941-154852 | |
| RNAseq coverage | 1973x (Rank: top 6%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009548 | 1e-38 | 91.25% | |
| Bombyx | BGIBMGA013451-TA | 3e-38 | 86.25% | |
| Drosophila | CG32230-PA | 2e-31 | 72.15% | |
| EBI UniRef50 | UniRef50_Q4PM95 | 3e-23 | 64.20% | NADH dehydrogenase 1 alpha subcomplex n=3 Tax=Ixodoidea RepID=Q4PM95_IXOSC |
| NCBI RefSeq | XP_001656091.1 | 5e-32 | 75.00% | NADH:ubiquinone dehydrogenase, putative [Aedes aegypti] |
| NCBI nr blastp | gi|255710243 | 1e-31 | 77.50% | putative NADH:ubiquinone dehydrogenase [Ochlerotatus triseriatus] |
| NCBI nr blastx | gi|255710243 | 1e-31 | 77.50% | putative NADH:ubiquinone dehydrogenase [Ochlerotatus triseriatus] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | aag:AaeL_AAEL002881 | 1e-31 | ||
| K03948 (NDUFA4) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Parkinson's disease | ||||
| InterPro domain | [1-83] IPR010530 | 3e-43 | NADH-ubiquinone reductase complex 1 MLRQ subunit | |
| Orthology group | MCL13053 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210558-TA
ATGCAAGGTTTAAGCATTCAAAGCTTGAAAAAACATAAAGCTCTGATTCCGTTGTACGTGTGCGTCGGGCTCGGCTGTGCAGGCTCGGTGTTTTACCTGGCGCGTCTGGCTCTGCGCTCGCCCGACGTCAGCTGGAACAAGAAGACCAACCCCGAGCCTTGGCAAGAGTACAGGAATAAACAATACAAGTTCTACTCACCAACCAGAGACTACTCCAAGGAGGAGTCTCCCGCTCCTAAGAGAGTCAGGAATCCCTGTAAGACCTTAGCATCCACAAGCGGGAAAACCCACCAGCGTTTCTTCGCTCTGACGATGCGGACACAGATGTTCACTCGTTTCATAGAAGAACGTTCGTTCGTATGCGACGCTGATCAAGCCCTGTCCTTCTTCGACGAATGCATAGAGAGAGTTGCTAGCGAGGAACCCTTACTAGGAATGGACGATAGTAATACATCTGAGAGGACCGTGTTTGTACTACCTCCGGACCCGCCGGATACCGGTAATACATAA
>DPOGS210558-PA
MQGLSIQSLKKHKALIPLYVCVGLGCAGSVFYLARLALRSPDVSWNKKTNPEPWQEYRNKQYKFYSPTRDYSKEESPAPKRVRNPCKTLASTSGKTHQRFFALTMRTQMFTRFIEERSFVCDADQALSFFDECIERVASEEPLLGMDDSNTSERTVFVLPPDPPDTGNT-