| DPOGS210717 | ||
|---|---|---|
| Transcript | DPOGS210717-TA | 501 bp |
| Protein | DPOGS210717-PA | 166 aa |
| Genomic position | DPSCF300013 - 198825-199721 | |
| RNAseq coverage | 825x (Rank: top 16%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007080 | 7e-42 | 80.39% | |
| Bombyx | BGIBMGA006329-TA | 3e-37 | 76.60% | |
| Drosophila | CG18428-PA | 5e-19 | 55.29% | |
| EBI UniRef50 | UniRef50_D6WEC8 | 3e-32 | 82.05% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WEC8_TRICA |
| NCBI RefSeq | XP_968591.1 | 6e-33 | 82.05% | PREDICTED: similar to SRp25 nuclear protein [Tribolium castaneum] |
| NCBI nr blastp | gi|383861511 | 7e-32 | 75.29% | PREDICTED: uncharacterized protein LOC100881140 [Megachile rotundata] |
| NCBI nr blastx | gi|383861511 | 1e-44 | 62.07% | PREDICTED: uncharacterized protein LOC100881140 [Megachile rotundata] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ||||
| InterPro domain | [3-159] IPR019532 | 7.1e-41 | Nuclear RNA-splicing-associated protein, SR-25 | |
| Orthology group | MCL16951 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210717-TA
ATGGGTAAAGAAAAAGCTAAAAAACGTCGACACTCCACATCCGAAAGCTCTAGCTCAAGTAGTTCCTCAGATTCCAGCCGGGAAAAGAAAAAATTACGGAAATTAAAAAAGAAATTGAAAAAGGAACAGAAAAAAACGGAGAAATTGTTAAAGAAAAAGCTCAAAGAGGAAAAAAAGAAACTGAAGCGCAAGCAGTCTGAAGAAAGAAGCCAAAATCAGGAGAAAACGAAAGATGAAGCGTCATCAGACATCCCCCTAGAGCTAATGGAGAAGTCCAAAGCAATGGCACCAATGACTAAGGAAGAGTGGGAGAAACGACAGAGTGTCATTCGAAGGGTACAAGATGAGGAGACTGGAAGATACAGGTTAATAAAAGGTGATGGGGAGGTGATAGAAGAGATAGTTTCAAGAGACCGACACAAAGAGATTAATCGTCAAGCTACAATGGCCGATGGCAATTTCTTTCAGTTGCAAACTGGTCAAAAGAGAGATATAAAGTAG
>DPOGS210717-PA
MGKEKAKKRRHSTSESSSSSSSSDSSREKKKLRKLKKKLKKEQKKTEKLLKKKLKEEKKKLKRKQSEERSQNQEKTKDEASSDIPLELMEKSKAMAPMTKEEWEKRQSVIRRVQDEETGRYRLIKGDGEVIEEIVSRDRHKEINRQATMADGNFFQLQTGQKRDIK-