| DPOGS210727 | ||
|---|---|---|
| Transcript | DPOGS210727-TA | 555 bp |
| Protein | DPOGS210727-PA | 184 aa |
| Genomic position | DPSCF300013 + 12380-12934 | |
| RNAseq coverage | 1605x (Rank: top 8%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006432 | 3e-97 | 94.09% | |
| Bombyx | BGIBMGA006257-TA | 2e-93 | 89.13% | |
| Drosophila | R-PB | 2e-85 | 86.41% | |
| EBI UniRef50 | UniRef50_A6NIZ1 | 1e-82 | 81.62% | Ras-related protein Rap-1b-like protein n=106 Tax=root RepID=RP1BL_HUMAN |
| NCBI RefSeq | NP_001036972.1 | 5e-92 | 89.13% | ras protein [Bombyx mori] |
| NCBI nr blastp | gi|112983416 | 7e-91 | 89.13% | ras protein [Bombyx mori] |
| NCBI nr blastx | gi|112983416 | 2e-87 | 89.13% | ras protein [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016020 | 1.3e-120 | membrane | |
| GO:0007165 | 1.3e-120 | signal transduction | ||
| GO:0006184 | 1.3e-120 | GTP catabolic process | ||
| GO:0005525 | 1.3e-120 | GTP binding | ||
| GO:0003924 | 1.3e-120 | GTPase activity | ||
| GO:0007264 | 1.1e-56 | small GTPase mediated signal transduction | ||
| GO:0015031 | 1.3e-35 | protein transport | ||
| GO:0005622 | 3.2e-11 | intracellular | ||
| KEGG pathway | aag:AaeL_AAEL009377 | 2e-90 | ||
| K04353 (RAP1A) | maps-> | Chemokine signaling pathway | ||
| Leukocyte transendothelial migration | ||||
| MAPK signaling pathway | ||||
| Neurotrophin signaling pathway | ||||
| Focal adhesion | ||||
| Long-term potentiation | ||||
| Renal cell carcinoma | ||||
| InterPro domain | [1-167] IPR020849 | 1.3e-120 | Small GTPase superfamily, Ras type | |
| [5-165] IPR001806 | 1.1e-56 | Small GTPase superfamily | ||
| [4-167] IPR003579 | 1.3e-35 | Small GTPase superfamily, Rab type | ||
| [1-158] IPR005225 | 3.1e-32 | Small GTP-binding protein domain | ||
| [6-167] IPR003578 | 3.2e-11 | Small GTPase superfamily, Rho type | ||
| Orthology group | MCL13631 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210727-TA
ATGCGCGAATACAAAATAGTCGTTCTGGGTAGCGGGGGCGTGGGAAAATCCGCCCTGACAGTACAATTCGTACAAGGCATCTTTGTGGAGAAATACGACCCCACCATCGAAGACAGCTATCGGAAACAAGTAGAAGTTGACGGACAGCAATGCATGCTCGAAATTCTAGACACGGCCGGAACGGAGCAGTTTACCGCTATGAGAGATTTATATATGAAAAACGGACAGGGGTTTGTCTTAGTATACTCTATAACAGCCCAATCGACTTTCAACGACTTACAGGATTTGAGGGAACAGATTCTGCGGGTGAAGGACAAGGTGGATGTACCAATGGTGTTGGTTGGCAACAAGTGTGACCTGGAGGCGGAGCGCGTGGTTGGCAAGCAACAGGGCGCGAACCTCGCAAACCATTTCGATTGCGTCTTTATGGAGACCTCCGCGAAGGCTAAAATCAGTGTGAACGAAGTGTTCTACGATCTAGTGCGACAGATTAACAAAAAATCACCCAAGGAGGAAAAAAACAAGAAGAAACCAAGATTATGTCGCATGCTGTAA
>DPOGS210727-PA
MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDKVDVPMVLVGNKCDLEAERVVGKQQGANLANHFDCVFMETSAKAKISVNEVFYDLVRQINKKSPKEEKNKKKPRLCRML-