DPOGS210794 | ||
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Transcript | DPOGS210794-TA | 681 bp |
Protein | DPOGS210794-PA | 226 aa |
Genomic position | DPSCF300027 - 1164537-1168196 | |
RNAseq coverage | 1145x (Rank: top 11%) |
Annotation | ||||
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Heliconius | HMEL007740 | 4e-30 | 70.00% |   |
Bombyx | BGIBMGA007109-TA | 2e-107 | 86.92% |   |
Drosophila | synaptogyrin-PA | 5e-54 | 47.49% |   |
EBI UniRef50 | UniRef50_F4W8F8 | 9e-70 | 56.96% | Synaptogyrin-2 n=4 Tax=Endopterygota RepID=F4W8F8_ACREC |
NCBI RefSeq | XP_001605760.1 | 1e-76 | 67.61% | PREDICTED: similar to synaptogyrin, putative [Nasonia vitripennis] |
NCBI nr blastp | gi|307199468 | 2e-75 | 63.72% | Synaptogyrin-2 [Harpegnathos saltator] |
NCBI nr blastx | gi|345485430 | 1e-84 | 67.54% | PREDICTED: synaptogyrin-2-like [Nasonia vitripennis] |
Group | ||||
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KEGG pathway | tgu:100223478 | 1e-34 |   | |
  | K04403 (MAP3K7IP1, TAB1) | maps-> | Leishmaniasis | |
  |   |   | Toll-like receptor signaling pathway | |
  |   |   | MAPK signaling pathway | |
  |   |   | NOD-like receptor signaling pathway | |
InterPro domain | [24-165] IPR021128 | 1.3e-19 | MARVEL-like domain | |
Orthology group | MCL10835 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210794-TA
ATGGAGTCAGCTGGTGCTTATGGTGGTGGCAAAGCTGGTGGAGCCTTCGATCCTCAGGCTTTTGTTCAAAAGCCTCCGGTTATTGTTCGCTCCGTTTGTTGGCTGTTCAGTGTGATTGTAATGGGCTGTATATCTGCCAAGGGCTGGTACATCAGCAAAACAGACGGCAAAGAGTACTGTGTCTACAACGATGATACAAATGCTTGCAATTATGGAGTCGGAATCTCAGTCATAGCATTTGTTGCATCTATAGCTTTCATTGTGGGGGAGTACTTGTTTGAACAAATGTCCTCCGTGAAGACAAGAAAACATTATGTTCTTGCTGATATGGGATTTTCTGCGTTCTGGGCGTTTTTATATTTCGTGGGCTTCTGTTATTTGTCCAACGCCTGGGGTAAGACTGAGAACCCGCCGATGGGTACAGCCAACAATATGCAGGGAGCCATCGCGTTCTGTTTCTTCTCGATTTTTGCTTGGGTAGCGTGTGCGTTCTTCGCATTCCAACGCTTCCGTATGGGCGCTGACGCGGCCTTCGCTCCCGCATACGAAGTTGAAGGCGCTGGCAGCCCGGGTACCTTCCCCGCCTACCCCGGCGCTCCGGACCCACAGCCGGCGTACAGCGACCCACCCTTCCAACAACAACACACTGGTAACATGGACTACACCGCCCCTACATACTGA
>DPOGS210794-PA
MESAGAYGGGKAGGAFDPQAFVQKPPVIVRSVCWLFSVIVMGCISAKGWYISKTDGKEYCVYNDDTNACNYGVGISVIAFVASIAFIVGEYLFEQMSSVKTRKHYVLADMGFSAFWAFLYFVGFCYLSNAWGKTENPPMGTANNMQGAIAFCFFSIFAWVACAFFAFQRFRMGADAAFAPAYEVEGAGSPGTFPAYPGAPDPQPAYSDPPFQQQHTGNMDYTAPTY-