DPOGS210847 | ||
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Transcript | DPOGS210847-TA | 543 bp |
Protein | DPOGS210847-PA | 180 aa |
Genomic position | DPSCF300027 + 462684-463485 | |
RNAseq coverage | 832x (Rank: top 15%) |
Annotation | ||||
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Heliconius | HMEL012764 | 4e-87 | 86.19% |   |
Bombyx | BGIBMGA006975-TA | 1e-76 | 82.78% |   |
Drosophila | mRpL12-PA | 1e-39 | 62.75% |   |
EBI UniRef50 | UniRef50_E2AXN5 | 8e-46 | 56.83% | 39S ribosomal protein L12, mitochondrial n=2 Tax=Camponotus floridanus RepID=E2AXN5_CAMFO |
NCBI RefSeq | NP_001040523.1 | 3e-75 | 82.78% | mitochondrial ribosomal protein L12 precursor [Bombyx mori] |
NCBI nr blastp | gi|183979274 | 6e-85 | 85.00% | similar to CG5012-PA [Papilio xuthus] |
NCBI nr blastx | gi|183979274 | 3e-82 | 85.00% | similar to CG5012-PA [Papilio xuthus] |
Group | ||||
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Gene Ontology | GO:0005840 | 1e-26 | ribosome | |
GO:0006412 | 1e-26 | translation | ||
GO:0005622 | 1e-26 | intracellular | ||
GO:0003735 | 1e-26 | structural constituent of ribosome | ||
KEGG pathway | wpi:WPa_0555 | 4e-12 |   | |
  | K02935 (RP-L7, rplL) | maps-> | Ribosome | |
InterPro domain | [1-180] IPR015607 | 1.1e-65 | Ribosomal protein L12, mitochondrial | |
[114-179] IPR013823 | 1e-26 | Ribosomal protein L7/L12, C-terminal | ||
[108-179] IPR014719 | 6e-19 | Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like | ||
[49-105] IPR008932 | 8.2e-12 | Ribosomal protein L7/L12, oligomerisation | ||
Orthology group | MCL14840 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210847-TA
ATGAATAGTATCAGGATAGTAAGAAGGCTTCCTCTTTGCCAATGGAGATCATTCTCGAGATGCACAGTTTTGAACCAAGAAGTAGCAGAAGCTATAACCCCACTCACAGTACCTCCTCCTGAAGGAGTGGACAAACCAATTTCACCAAAAATTGAGAAAATTGTGTCAGAAATAACAAATCTAAATCTTCTTGAGGTGTCAGAACTTAGTCAAGTGTTAAAAAGAAGGTTAAACCTCCCTGATGCTCCTGTCATGCCAGTTGGCGGGTTTGCTATGGCGGCACCAGCAGCACAGGAAGAGGAGGAGGCGGCACCAAAGGCTGTCAAAACCAGCTACACTGTTAAAATGACAAAGTTTGATGACAAACAAAAGGTGGCACTAATCAAAGAAGTAAAGAGTCTCTTAGAAGGATATAACCTGGTTCAGGCCAAGAAGTTTGTTGAAAGCGTACCTACCGTTGTAAAAGCGGACATCTCTAAGGATGAAGCTGAAAAACTAAAAGAGGCATTGTCCAAAGTTGGAGCTGTCATAGAAATTGATTAA
>DPOGS210847-PA
MNSIRIVRRLPLCQWRSFSRCTVLNQEVAEAITPLTVPPPEGVDKPISPKIEKIVSEITNLNLLEVSELSQVLKRRLNLPDAPVMPVGGFAMAAPAAQEEEEAAPKAVKTSYTVKMTKFDDKQKVALIKEVKSLLEGYNLVQAKKFVESVPTVVKADISKDEAEKLKEALSKVGAVIEID-