| DPOGS210849 | ||
|---|---|---|
| Transcript | DPOGS210849-TA | 1221 bp |
| Protein | DPOGS210849-PA | 406 aa |
| Genomic position | DPSCF300027 + 493198-498804 | |
| RNAseq coverage | 504x (Rank: top 25%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008327 | 1e-65 | 39.17% | |
| Bombyx | BGIBMGA006977-TA | 2e-164 | 82.01% | |
| Drosophila | Arc42-PA | 1e-95 | 45.62% | |
| EBI UniRef50 | UniRef50_Q178X6 | 3e-106 | 50.25% | Acyl-coa dehydrogenase n=4 Tax=Culicidae RepID=Q178X6_AEDAE |
| NCBI RefSeq | XP_973830.1 | 2e-109 | 51.87% | PREDICTED: similar to Short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (SCAD) (Butyryl-CoA dehydrogenase) [Tribolium castaneum] |
| NCBI nr blastp | gi|91088951 | 4e-108 | 51.87% | PREDICTED: similar to Short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (SCAD) (Butyryl-CoA dehydrogenase) [Tribolium castaneum] |
| NCBI nr blastx | gi|91088951 | 8e-104 | 52.00% | PREDICTED: similar to Short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (SCAD) (Butyryl-CoA dehydrogenase) [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016627 | 2.4e-70 | oxidoreductase activity, acting on the CH-CH group of donors | |
| GO:0008152 | 2.4e-70 | metabolic process | ||
| GO:0055114 | 2.4e-70 | oxidation-reduction process | ||
| GO:0003995 | 1.9e-33 | acyl-CoA dehydrogenase activity | ||
| GO:0050660 | 4.7e-32 | flavin adenine dinucleotide binding | ||
| KEGG pathway | cfa:477517 | 4e-102 | ||
| K00248 (E1.3.99.2, bcd) | maps-> | Fatty acid metabolism | ||
| Valine, leucine and isoleucine degradation | ||||
| Butanoate metabolism | ||||
| InterPro domain | [30-269] IPR009100 | 2.4e-70 | Acyl-CoA dehydrogenase/oxidase | |
| [250-404] IPR009075 | 9.1e-53 | Acyl-CoA dehydrogenase/oxidase C-terminal | ||
| [256-396] IPR006090 | 1.1e-39 | Acyl-CoA oxidase/dehydrogenase, type 1 | ||
| [148-249] IPR006091 | 1.9e-33 | Acyl-CoA oxidase/dehydrogenase, central domain | ||
| [25-145] IPR013786 | 4.7e-32 | Acyl-CoA dehydrogenase/oxidase, N-terminal | ||
| [34-145] IPR006092 | 3.4e-26 | Acyl-CoA dehydrogenase, N-terminal | ||
| Orthology group | MCL25293 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210849-TA
ATGGTTGCGGGTGCAATTTTAAAAACAACCAAATTAAACTCAAACTTGCTGCAATGTGTAAAATTTGTTGCACAAAGCCGCAGTTTTACAACCCAGCTGACTGAACAACAACTTGAAATACAAGAACTGACAAGAAACTTTAGTGAAAATCAACTAAAGCCCAAAGCCGCCAAATTAGACTCTGAAGGTCGCTTCCCATTTAGCGAGATAAAATCCCTTACAAATCTGGGTTTGATGGGCGCATGTGTCGACCAAAGCTATGGAGGTCTTGATCTGGACTACCTGTCGTTAGCGATAGCCGTCGAGGAGATCTCCCGCGGATGTGCCAGCACTGGAATGATACTCTCCATACACAACTTCCTCTACGCAAACTTGGTTAACGAGAAGGGCACTCCCGAACAGAAGGAGAGATTTCTGTGCGATTTCACAAAGGGCTCGCTTGGATGTTTCGCTTTGAGTGAACCCAATGCCGGCAGCGACGTCGCTAACATAAGGACGAGAGCACGAAAGGATGGTGATTATTGGATATTGAATGGTAAGAAGAGCTGGGTGTCCACGGCCGTGGAGGGGTCCGCCGCCGCCGTCTTCGCGACCTTCGACCCTGAACTACGGCATAAAGGACTTGCTTGTTTCCTAGTACCTTTGGACGCTGAGGGAGTTTTCAGAGGCAAGAAAGAGCCTTTAATGGGCGTCAGGGCGGTGACGGCGTGCGACCTCATGCTGGAGGAGGTCCGCCTGCCGAGCTCGTGTCTGCTGGGGAGGGAGGGGGAGGGGTTCAAGATAGCCATGGAACAGCTCGACCAGGGAAGGATAGGCATCGCCGCGCACGCTGTCGGCATCGCCCAGTCAGCTTTAGACACAGCAATATCGTATGCCAAAGAAAGACACGCCTTCGGTAAAAATCTAACAAGACTGCCGTCGGTTAAGGATCGTCTGACGGACATGTGCATGCTGGTGGAGACGGCGAGGCTGCTGACGTACCGCGCGGCCTGTGACGTCAGCACCAAGAACAGCGCGATGGCGAAGTACGTGGCCGGCCGCGCCGCCACGGCCGCGTCCGACCACTGCGTGCAGGTGCTGGGCGGCAGGGGGCTCTCCACGCACTACAGCGCCGAGAGACATTACAGGGACGCGAGAGGCACACAGATATACGGCGGAGTGACGGACATACAGAAACGATTGGTTGGACATTACCTGCTCAAAGAACACAACGCCTTGTAA
>DPOGS210849-PA
MVAGAILKTTKLNSNLLQCVKFVAQSRSFTTQLTEQQLEIQELTRNFSENQLKPKAAKLDSEGRFPFSEIKSLTNLGLMGACVDQSYGGLDLDYLSLAIAVEEISRGCASTGMILSIHNFLYANLVNEKGTPEQKERFLCDFTKGSLGCFALSEPNAGSDVANIRTRARKDGDYWILNGKKSWVSTAVEGSAAAVFATFDPELRHKGLACFLVPLDAEGVFRGKKEPLMGVRAVTACDLMLEEVRLPSSCLLGREGEGFKIAMEQLDQGRIGIAAHAVGIAQSALDTAISYAKERHAFGKNLTRLPSVKDRLTDMCMLVETARLLTYRAACDVSTKNSAMAKYVAGRAATAASDHCVQVLGGRGLSTHYSAERHYRDARGTQIYGGVTDIQKRLVGHYLLKEHNAL-