| DPOGS210968 | ||
|---|---|---|
| Transcript | DPOGS210968-TA | 720 bp |
| Protein | DPOGS210968-PA | 239 aa |
| Genomic position | DPSCF300004 - 357169-358221 | |
| RNAseq coverage | 595x (Rank: top 21%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL025050 | 9e-53 | 51.00% | |
| Bombyx | BGIBMGA006397-TA | 1e-23 | 43.56% | |
| Drosophila | ftz-PA | 1e-15 | 35.15% | |
| EBI UniRef50 | UniRef50_C0IMT1 | 2e-14 | 47.06% | Special homeobox protein 8 n=3 Tax=Bombyx mori RepID=C0IMT1_BOMMO |
| NCBI RefSeq | NP_001139537.1 | 3e-15 | 47.06% | special homeobox protein 1 [Bombyx mori] |
| NCBI nr blastp | gi|225703090 | 5e-14 | 47.06% | special homeobox protein 1 [Bombyx mori] |
| NCBI nr blastx | gi|1346304 | 3e-15 | 29.41% | ftz [Drosophila hydei] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 3.5e-23 | DNA binding | |
| GO:0006355 | 3.5e-23 | regulation of transcription, DNA-dependent | ||
| GO:0005515 | 2.1e-22 | protein binding | ||
| GO:0043565 | 2.8e-22 | sequence-specific DNA binding | ||
| GO:0003700 | 2.8e-22 | sequence-specific DNA binding transcription factor activity | ||
| KEGG pathway | ||||
| InterPro domain | [50-113] IPR012287 | 3.5e-23 | Homeodomain-related | |
| [44-122] IPR009057 | 2.1e-22 | Homeodomain-like | ||
| [53-115] IPR001356 | 2.8e-22 | Homeobox | ||
| Orthology group | MCL20936 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210968-TA
ATGTTTCACAACGTTTTAATGACTACATTGACTCCAGTCTCTAATAAAAATGAGATAAATTGCTGGGAAAATCAACCGTTTACCACAGTTTGGCCAGAATCGGAACAATATAGGCCATCAAGAGATTCACATGTTACAAGAACTATCAAAAAGAAGAGCAAGCGTAACAGAACCGCTTACACAACAGAACAGCTGAAAATGTTGGAAAGAACTTTCTCACGATCAAAATACATCGATGCAGAACGTCGCAAAGAACTTGCGGAATGTTTAAATATTGGCGAAAAATGCGTTAAAGTGTGGTTCCAGAATAGAAGGATGAAGGAAAAGAAGGAATCATCATTGTCGAGTGATTCGTCAAGTGAATCTTGTGCTGCGGAATCCATTACCCCTCCTCCAGAGAGAATAAACGGAATAGAAAGTGAATATAACTGTCCAGCCCTTAATTATAACCCAAGCCAACAGATCCCCAATTATGGATATTACCAAGAAAACCTTGCTTCGGAACCTCAAACATCGTATTATCCACAGGAGACATCATATCCTAACTATCTTCCTTCATACACAAGTGATTATTTCAGAAATGATATCAATGTATATCCCACCCAGTACTATCCTTATACTGTGCCTGAATACAACTACACACACATGGAACATGTTGATCAGAAACAGGAAACAGGTAATAGCTGGTCAGATACTGCGTTCGATTTGAATTTCCTTTAA
>DPOGS210968-PA
MFHNVLMTTLTPVSNKNEINCWENQPFTTVWPESEQYRPSRDSHVTRTIKKKSKRNRTAYTTEQLKMLERTFSRSKYIDAERRKELAECLNIGEKCVKVWFQNRRMKEKKESSLSSDSSSESCAAESITPPPERINGIESEYNCPALNYNPSQQIPNYGYYQENLASEPQTSYYPQETSYPNYLPSYTSDYFRNDINVYPTQYYPYTVPEYNYTHMEHVDQKQETGNSWSDTAFDLNFL-