| DPOGS211110 | ||
|---|---|---|
| Transcript | DPOGS211110-TA | 678 bp |
| Protein | DPOGS211110-PA | 225 aa |
| Genomic position | DPSCF300007 - 696982-697957 | |
| RNAseq coverage | 445x (Rank: top 28%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012443 | 7e-121 | 91.11% | |
| Bombyx | BGIBMGA002985-TA | 4e-110 | 85.33% | |
| Drosophila | Paf-AHalpha-PB | 2e-78 | 59.11% | |
| EBI UniRef50 | UniRef50_G6DLC7 | 7e-131 | 100.00% | Platelet-activating factor acetylhydrolase alpha subunit-like protein n=2 Tax=Endopterygota RepID=G6DLC7_DANPL |
| NCBI RefSeq | NP_001040515.1 | 1e-105 | 84.00% | platelet-activating factor acetylhydrolase alpha subunit-like protein [Bombyx mori] |
| NCBI nr blastp | gi|308743357 | 1e-113 | 85.78% | platelet-activating factor acetylhydrolase alpha subunit-like protein [Antheraea pernyi] |
| NCBI nr blastx | gi|308743357 | 6e-114 | 85.78% | platelet-activating factor acetylhydrolase alpha subunit-like protein [Antheraea pernyi] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016787 | 3.8e-64 | hydrolase activity | |
| KEGG pathway | dme:Dmel_CG8962 | 1e-76 | ||
| K01062 (E3.1.1.47, PAFAH) | maps-> | Ether lipid metabolism | ||
| InterPro domain | [1-211] IPR013831 | 3.8e-64 | Esterase, SGNH hydrolase-type, subgroup | |
| [1-212] IPR013830 | 1.5e-49 | Esterase, SGNH hydrolase-type | ||
| Orthology group | MCL17070 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS211110-TA
ATGAATCCCTGTTCCGTGGCAGTTCCGCAACAAGATACTGATGGTGATGGACGTTGGAATAGCATCCACAATAGATTCCTTTCGGACGCAAAAGGAAAGGATGGAGATGTTATATTCATCGGTGATTCTATACTACAAGCTTTAGAACATACGGAAGTTTGGAACCAATGGTTTGCACCACTTCACTGCCTTAATTTTAGTATTTACAAAGATCAAACTCAAAATGTTTTGTGGCGTATAAGAAATGGAGAGCTTGATCATGTTGACCCGAGAGTTATAGTTCTGCATGTTGGAACAAATAATGTTGAGCACACACCTGAGCAAGTATGTGAGGGAATCTTAGAAATAGTTCACACAATAAGAGAAAAGCATCCAAGTGTTTATATTGTTTTACCTAGTCTACTTCCTAGAGGACAACATCCAAATGTACTGAGAGACAGGAACTCGAAAATTAATCAGCTTTTGAAAGAAAAAGTTGCTAATATGAAAAAGGTTGAAATGGTGTCAATAGACAAAGGGTTTATCCAGAACGATGGAACAATAAGCCATCATGATATGCATGATTACCTCATACCGACTAATGCAGCTTGCAGGAAGGCCTTCGAACCTGTTTATGATCTCTTACAACAAATTTTATCAGAGGGTGAAACCGAAAAGGATTTGACGCCCTCAGAATAA
>DPOGS211110-PA
MNPCSVAVPQQDTDGDGRWNSIHNRFLSDAKGKDGDVIFIGDSILQALEHTEVWNQWFAPLHCLNFSIYKDQTQNVLWRIRNGELDHVDPRVIVLHVGTNNVEHTPEQVCEGILEIVHTIREKHPSVYIVLPSLLPRGQHPNVLRDRNSKINQLLKEKVANMKKVEMVSIDKGFIQNDGTISHHDMHDYLIPTNAACRKAFEPVYDLLQQILSEGETEKDLTPSE-