DPOGS211141 | ||
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Transcript | DPOGS211141-TA | 399 bp |
Protein | DPOGS211141-PA | 132 aa |
Genomic position | DPSCF300007 - 182628-183279 | |
RNAseq coverage | 147x (Rank: top 54%) |
Annotation | ||||
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Heliconius | HMEL017211 | 6e-71 | 96.97% |   |
Bombyx | BGIBMGA003013-TA | 2e-55 | 80.77% |   |
Drosophila | CG34400-PC | 7e-54 | 77.37% |   |
EBI UniRef50 | UniRef50_E2C844 | 1e-51 | 78.52% | Whirlin n=10 Tax=Endopterygota RepID=E2C844_HARSA |
NCBI RefSeq | XP_318531.2 | 6e-53 | 77.21% | AGAP010776-PA [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|350404685 | 7e-52 | 80.60% | PREDICTED: whirlin-like isoform 2 [Bombus impatiens] |
NCBI nr blastx | gi|58391350 | 2e-51 | 77.21% | AGAP010776-PA [Anopheles gambiae str. PEST] |
Group | ||||
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Gene Ontology | GO:0005515 | 3.2e-15 | protein binding | |
KEGG pathway |   | |||
InterPro domain | [9-127] IPR001478 | 3.2e-15 | PDZ/DHR/GLGF | |
Orthology group | MCL16662 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS211141-TA
ATGCAGCGCCTGCAACATGGCGATGCCCAGATGGACGAAGGCAGAGCCGCGAGGGTTGTTCCGGATCACCATGGAAACCTACACATCACTGTCAAGAAAACCAAGCCGATCCTTGGCATCGCTATCGAGGGCGGCGCCAATACTAAGCATCCGCTACCCAGAATAATCAATATTCACGAGCATGGCTCAGCGTATGAAGCTGGGGGACTAGAAGTGGGACAATTGATACTGGCGGTGGATGGGCATAGAGTCGAGGGCATGCAACATCAAGAAGTCGCTCGACTTATTGCAGAGTCTTTTGCGCAACGAGATAAGCCAGAGATTGAGTTCTTGGTTGTAGAAGCGAAGAAGTCAAATCTGGAACCAAAGCCAACTGCGCTAATTTTTTTGGAGGCCTAA
>DPOGS211141-PA
MQRLQHGDAQMDEGRAARVVPDHHGNLHITVKKTKPILGIAIEGGANTKHPLPRIINIHEHGSAYEAGGLEVGQLILAVDGHRVEGMQHQEVARLIAESFAQRDKPEIEFLVVEAKKSNLEPKPTALIFLEA-