| DPOGS211226 | ||
|---|---|---|
| Transcript | DPOGS211226-TA | 624 bp |
| Protein | DPOGS211226-PA | 207 aa |
| Genomic position | DPSCF300007 + 1340240-1341025 | |
| RNAseq coverage | 464x (Rank: top 27%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002213 | 7e-115 | 91.79% | |
| Bombyx | BGIBMGA006641-TA | 2e-25 | 33.33% | |
| Drosophila | RabX6-PA | 2e-83 | 64.32% | |
| EBI UniRef50 | UniRef50_E2AMS1 | 2e-85 | 69.57% | GTP-binding protein ypt7 n=9 Tax=Pancrustacea RepID=E2AMS1_CAMFO |
| NCBI RefSeq | NP_001040271.1 | 7e-105 | 84.06% | ras-related protein Rab7 [Bombyx mori] |
| NCBI nr blastp | gi|323434871 | 4e-105 | 87.44% | Rab7 [Helicoverpa zea] |
| NCBI nr blastx | gi|323434871 | 8e-102 | 87.44% | Rab7 [Helicoverpa zea] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0007264 | 9.5e-34 | small GTPase mediated signal transduction | |
| GO:0005525 | 9.5e-34 | GTP binding | ||
| GO:0015031 | 7.3e-26 | protein transport | ||
| GO:0016020 | 1.1e-09 | membrane | ||
| GO:0007165 | 1.1e-09 | signal transduction | ||
| GO:0006184 | 1.1e-09 | GTP catabolic process | ||
| GO:0003924 | 1.1e-09 | GTPase activity | ||
| KEGG pathway | ||||
| InterPro domain | [10-174] IPR001806 | 9.5e-34 | Small GTPase superfamily | |
| [9-177] IPR003579 | 7.3e-26 | Small GTPase superfamily, Rab type | ||
| [10-167] IPR005225 | 2.4e-17 | Small GTP-binding protein domain | ||
| [6-177] IPR020849 | 1.1e-09 | Small GTPase superfamily, Ras type | ||
| Orthology group | MCL17109 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS211226-TA
ATGGCTATTGTAAAAACTCCGGTACTCAAAGTGATTTTATGCGGCGAATATGGTGTGGGGAAAAGCTCAATATTTCGACGATTTATTAACAATACATTTTTACCGAATTCTGATAGGAGGTCTACTTTAGGATTAGATCATTTCGAAAAACTTTTCCATGTTGGGGACAAAGATGTCAAGTTACAGCTATGGGACACCGGTGGCATGGAGAGAATAGCATCAGTTACTTCAAGTTATTATAAATATGCCGAGGCAGCTGTATTAGTTTTTTCTTTAGATAATGCCTCATCATTTCATGTACTCAGCCAACATCTACTAGATATAGTTACTTATGCTGAGAATGCCAAAATATTTTTATGTGGTAATAAATCAGATTTAGAAGGATTGTGTCCTCAAGTAACAGATGCTGATATAGAGAACTTTTGTGAACAATGTCACAATTTGATAAGCAGTACATATAAGACATCATGCAAAAGCGGGAAAGGCTTGGATGAGATGTTCTCGGATATAGCACATCAGCTGGTTGAGTCAAATAGATCCCGGATTGAGCTACAGAGACTTGACCACAACAGCTTCAAAATAACCCATCCCGAACCCCCCGACGAACCCCCATGTAGCTGTTGA
>DPOGS211226-PA
MAIVKTPVLKVILCGEYGVGKSSIFRRFINNTFLPNSDRRSTLGLDHFEKLFHVGDKDVKLQLWDTGGMERIASVTSSYYKYAEAAVLVFSLDNASSFHVLSQHLLDIVTYAENAKIFLCGNKSDLEGLCPQVTDADIENFCEQCHNLISSTYKTSCKSGKGLDEMFSDIAHQLVESNRSRIELQRLDHNSFKITHPEPPDEPPCSC-