DPOGS211264 | ||
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Transcript | DPOGS211264-TA | 522 bp |
Protein | DPOGS211264-PA | 173 aa |
Genomic position | DPSCF300506 + 49196-50121 | |
RNAseq coverage | 730x (Rank: top 18%) |
Annotation | ||||
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Heliconius | HMEL003812 | 2e-90 | 88.37% |   |
Bombyx | BGIBMGA001829-TA | 2e-48 | 84.00% |   |
Drosophila | CG6833-PB | 6e-56 | 60.23% |   |
EBI UniRef50 | UniRef50_F4WQT0 | 6e-60 | 67.52% | RNA exonuclease 4 n=8 Tax=Formicidae RepID=F4WQT0_ACREC |
NCBI RefSeq | XP_396691.3 | 4e-59 | 62.80% | PREDICTED: similar to XPMC2 prevents mitotic catastrophe 2 homolog [Apis mellifera] |
NCBI nr blastp | gi|307194511 | 1e-61 | 68.15% | RNA exonuclease 4 [Harpegnathos saltator] |
NCBI nr blastx | gi|307194511 | 2e-58 | 68.15% | RNA exonuclease 4 [Harpegnathos saltator] |
Group | ||||
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Gene Ontology | GO:0004527 | 2.3e-40 | exonuclease activity | |
GO:0005622 | 2.3e-40 | intracellular | ||
GO:0003676 | 3e-29 | nucleic acid binding | ||
KEGG pathway |   | |||
InterPro domain | [1-158] IPR006055 | 2.3e-40 | Exonuclease | |
[1-155] IPR012337 | 3e-29 | Ribonuclease H-like | ||
[1-149] IPR013520 | 9.7e-26 | Exonuclease, RNase T/DNA polymerase III | ||
Orthology group | MCL11995 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS211264-TA
ATGGATTGTGAGATGGTCGGTGTTGGTTACGAGGGTAATGACCACATGATAGCTAGGGTATCAATAGTCAATAAATTCGGAGACTGCATATACGACAAGTTCGTTAAAGCCAGAGAAGAGGTAGTGGACTACAGAACCAAAGTTAGTGGCATCAGAAAAGAGGACCTGTTGAACGGAGAAGAATTTGCAACAGTTCAGAAAGAGGTCTCCGAGCTGATTAAGGGAAAGATACTCGTAGGGCACTCGTTAAAAAATGATTTAAGTGTGTTATTTCTGTCCCATCCGAAACGTAATATAAGGGATACATCTAGATACAAACCTTTCCGTAAGATAACCAAAGGCAGCACACCGTCACTGAAACGCCTGGCCAAGGAGATACTCGGCATCGACATACAGGACGGCGAGCACAGCTCGGTGGAAGATGCAAGGGCTGCGATGCAGATATACTGTACTGTACAGAAGAGCTGGGAACAGGCGCTCAGTGAGAAGCGAGGGTACAGCAGGAAGTTTGTGGAGACATAA
>DPOGS211264-PA
MDCEMVGVGYEGNDHMIARVSIVNKFGDCIYDKFVKAREEVVDYRTKVSGIRKEDLLNGEEFATVQKEVSELIKGKILVGHSLKNDLSVLFLSHPKRNIRDTSRYKPFRKITKGSTPSLKRLAKEILGIDIQDGEHSSVEDARAAMQIYCTVQKSWEQALSEKRGYSRKFVET-