DPOGS211467 | ||
---|---|---|
Transcript | DPOGS211467-TA | 528 bp |
Protein | DPOGS211467-PA | 175 aa |
Genomic position | DPSCF300113 - 593143-593670 | |
RNAseq coverage | 10x (Rank: top 84%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL014011 | 5e-86 | 87.57% |   |
Bombyx | BGIBMGA002733-TA | 3e-62 | 72.32% |   |
Drosophila | SIFR-PC | 3e-30 | 72.84% |   |
EBI UniRef50 | UniRef50_Q7Q9B7 | 1e-31 | 82.89% | AGAP003335-PA n=6 Tax=Coelomata RepID=Q7Q9B7_ANOGA |
NCBI RefSeq | XP_970225.1 | 2e-33 | 79.55% | PREDICTED: similar to SIFamide receptor [Tribolium castaneum] |
NCBI nr blastp | gi|340726492 | 7e-33 | 58.57% | PREDICTED: neuropeptide FF receptor 2-like [Bombus terrestris] |
NCBI nr blastx | gi|307175364 | 1e-32 | 57.45% | Orexin receptor type 2 [Camponotus floridanus] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0007186 | 3.3e-14 | G-protein coupled receptor protein signaling pathway | |
GO:0016021 | 3.3e-14 | integral to membrane | ||
KEGG pathway | dre:560955 | 2e-14 |   | |
  | K08375 (NPFFR2) | maps-> | Neuroactive ligand-receptor interaction | |
InterPro domain | [108-132] IPR000276 | 3.3e-14 | GPCR, rhodopsin-like, 7TM | |
Orthology group | MCL22678 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS211467-TA
ATGGCGCCTTTAAGAGTGTTGAGTGACTTCACGGATGACTTTCAGAACTTTTCCACACAACATCCGGGGAAACATCATTTCAGGCACAGGAATCATTCGCGGGATCATGCGAGGAATCATTTTGTGGACGTCATGTCCAATTCAATAATGGAAGTCATCAATACTAAACTGGTTCCTGAGAACAGCGTGCTCCCAGACCTGGAGCCACTGTCCACCCACATGGACGAGAGACACTCTCTGCTCCTTAATATAACTATGAACAGGTCAGACTTGGGCCTGGAGAGCGAGTTCATGTACCGCCACAGCGGCGCCATGACCGCGGTTTACTGTATCGCCTACCTGCTTGTCTTCGTCGTTGGCCTGGTGGGGAATTGCTTCGTGATCGCCGTCGTCTACCGCTCTCCTCGCATGAGGACCGTCACTAACTTCTTCATCGTCAACCTGGCGGTCGCAGATATTTTGGTCATAGTCTTCTGTCTCCCCGCTACGCTGATGTCCAACATATTTGTCCGTGAGTATTTTATCTAG
>DPOGS211467-PA
MAPLRVLSDFTDDFQNFSTQHPGKHHFRHRNHSRDHARNHFVDVMSNSIMEVINTKLVPENSVLPDLEPLSTHMDERHSLLLNITMNRSDLGLESEFMYRHSGAMTAVYCIAYLLVFVVGLVGNCFVIAVVYRSPRMRTVTNFFIVNLAVADILVIVFCLPATLMSNIFVREYFI-